Query= MSMg01no488_h08.b1 MSMg01no488_h08.b1 CHROMAT_FILE:
MSMg01no488_h08.b1 PHD_FILE: MSMg01no488_h08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:23 2005
(683 letters)
>mm_chr12_73975583_73976666
Length = 1084
Score = 1253 bits (648), Expect = 0.0
Identities = 672/680 (98%), Gaps = 1/680 (0%)
Strand = Plus / Minus
Query: 5 gaattccagattccgctaagacgtttggaagaaaaataatcacggtatatctaattctgt 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 gaattccagagtccgctaagacgtttggaagaaaaataatcacggtatatctaattctgt 825
Query: 65 ttaag-aaaaaaaaagctattttaatagcagaataatcttgtctctagttaggaaatatt 123
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 824 ttaagaaaaaaaaaagctattttaatagcagaataattttgtctctagttaggaaatatt 765
Query: 124 ttataagaatataatacttcctaaaagtagtcaagactctcattttcaaagtacatgtgt 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 764 ttataagaatataatacttcctaaaagtagtcaagactctcattttcaaagtacatgtat 705
Query: 184 atctagtcatacactagcttctagaatatcactgctgaaggaacacatacacacctccac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 704 atctagtcatacactagcttctagaatatcactgctgaaggaacacatacacacctctac 645
Query: 244 ctatgtgtgttcatgtcagtgtctgataaacaggaaatgaaacatgaatctatacaagta 303
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 644 ctatgtgtgttcatgtcagtgtctgataaataggaaatgaaacatgaatctatacaagta 585
Query: 304 actcagcaacatgcgtttatcctgtgtgtgtgctttggatgcagagagtttgcgtgttaa 363
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 584 actcagcaacatgcgtttatcctgtgtgtgtgctttggatgcagagaatttgcgtgttaa 525
Query: 364 atcctgagaatccatatgctaaaggcttaatgcccagaagagacactatgaggtgatggg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 atcctgagaatccatatgctaaaggcttaatgcccagaagagacactatgaggtgatggg 465
Query: 424 agttttaagagtgagaagttattgggtcattgtggcattagggataggggaccctgctcc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 agttttaagagtgagaagttattgggtcattgtggcattagggataggggaccctgctcc 405
Query: 484 ctatctctgcttttgatcaaaatgttttcacttgcatccacatgtgctcctgcgtggtgt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ctatctctgcttttgatcaaaatgttttcacttgcatccacatgtgctcctgcgtggtgt 345
Query: 544 gcccatctgcctccctcaccagagaatgaaacagttctcctacatgcctgagcttgcact 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gcccatctgcctccctcaccagagaatgaaacagttctcctacatgcctgagcttgcact 285
Query: 604 tagaacttgcaaactgagctcaataacccctttctccccagttagcctattcaccattct 663
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tagaactttcaaactgagctcaataacccctttctccccagttagcctattcaccattct 225
Query: 664 gggtagtcttccgttatctg 683
||||||||||||||||||||
Sbjct: 224 gggtagtcttccgttatctg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1084
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1074
Effective search space: 722802
Effective search space used: 722802
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_h08.g1 MSMg01no488_h08.g1 CHROMAT_FILE:
MSMg01no488_h08.g1 PHD_FILE: MSMg01no488_h08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:23 2005
(596 letters)
>mm_chr12_73821866_73822863
Length = 998
Score = 1083 bits (560), Expect = 0.0
Identities = 588/598 (98%), Gaps = 2/598 (0%)
Strand = Plus / Plus
Query: 1 agaaagcaattgaagaaagcaaagccaggcaaagaacgggtctgtttcttaggcaaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaagcaattgaagaaagcaaagccaggcaaagaacgggtctgtttcttaggcaaatgt 260
Query: 61 aacttttgctgtgttttgagaaccactctacttttaactgaaggaaacaaagtgacagtg 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacttttgccgtgttttgagaaccactctacttttaactgaaggaaacaaagtgacagtg 320
Query: 121 ttttgttagatatgagccctcggtgactgacacaaaaaggaggacctttgaaaggagggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttgttagatatgagccctcggtgactgacacaaaaaggaggacctttgaaaggagggt 380
Query: 181 aatgaagagaattaaagatcaagccatcatcctgagttgtaggaagtgagctgaaaataa 240
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 aatgaagagacttaaagatcaagccatcatcctgagttgtaggaagtgagctaaaaataa 440
Query: 241 gccgcctgcatctagtcctcaagagcccagggccccggccttttgaagtatgaagacaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccgcctgcatctagtcctcaagagcccagggccccggccttttgaagtatgaagacaga 500
Query: 301 gttccctacatcgagagcccagaacttctctgattccatagcaccctctctggcaagagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttccctacatcgagagcccagaacttctctgattccatagcaccctctctggcaagagt 560
Query: 361 tcccgataaacccattcacaatgagatatagaacaacaatgttgcttccaaagaaagcaa 420
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 561 tcccaataaacccattcacaatgagatataaaacaacaatgttgcttccaaagaaagcaa 620
Query: 421 cccttcttgctcaaatctcatcatgcatgtcaacacactgaacactaagaagccccacag 480
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 621 cccttcttgctcaaatctcatcattcatgtcaacacaccgaacactaagaagccccacag 680
Query: 481 agaagaaatctgtctagttttgttttattccaagggtccaacatatttgacagaggacgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaagaaatctgtctagttttgttttattccaagggtccaacatatttgacagaggacgc 740
Query: 541 ccttctatccccgaatctctattaaagttgggggggggg--agcctgcaatcaatagt 596
||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 741 ccttctatccccgaatctctactaaagttggggggggggggagcctgcaatcaatagt 798
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 998
Length adjustment: 10
Effective length of query: 586
Effective length of database: 988
Effective search space: 578968
Effective search space used: 578968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
