Query= MSMg01no489_c12.b1 MSMg01no489_c12.b1 CHROMAT_FILE:
MSMg01no489_c12.b1 PHD_FILE: MSMg01no489_c12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:17 2005
(667 letters)
>mm_chr12_68043750_68044814
Length = 1065
Score = 986 bits (510), Expect = 0.0
Identities = 621/676 (91%), Gaps = 36/676 (5%)
Strand = Plus / Minus
Query: 1 cccatttttaatggggttatttgattttctggagcccaccttcttgagttctttatatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 cccatttttaatggggttatttgattttctggagcccaccttcttgagttctttatatat 607
Query: 61 attggatattagtcccgtacctgatttaggataggtaaagatcctttcccaatctgttgg 120
|||||||||||||||| || ||| |||||||||||||||||||||||||||||||| |||
Sbjct: 606 attggatattagtcccctatctgctttaggataggtaaagatcctttcccaatctgatgg 547
Query: 121 tggtctttttgtcttgttgacggtgtcttttgccttgcagaagctttgcagttagcatcc 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 546 tggtctttttgtcttgttgacggtgtcttttgccttgcagaaactttgcagttagcatcc 487
Query: 181 tgtcatgtttcattatacaagcctgactttgaaaacattcctagtttcatttttttaaaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 486 tgtcatgtttcattatacaagcctgactttgaaaacattcctagtttcattttttt-taa 428
Query: 241 ctgtttttttttagccatttaaccatgtatgaacatctttctttcctatc----caaaaa 296
|||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 427 ctgtttccttttagccgtttaaccatgtatgaacatctttctttcctatcaaaacaaaaa 368
Query: 297 acaaaa--aacaaa---aaaaacaaaaaacaaaacaaaacaaacaaacaaaaaaaaccaa 351
|||||| |||||| |||||| |||||||||| |||| ||||||| || |||||||
Sbjct: 367 acaaaaagaacaaaaacaaaaac-aaaaacaaaaaaaaaaaaacaaa-aacaaaaacc-- 312
Query: 352 caaaacaaaacaaaaacagtcttttcttatggtgtatgatgattcagttgtatggcttct 411
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 c--aacaaaacaaaaacagtcttttcttatggtgtatgatgattcagttgtatggcttct 254
Query: 412 atataacctacaaacctaggtggtaaaattattaaattttgtgaagaaatttcatcaaag 471
|||||||| || ||||||||||||||||||||||||||||
Sbjct: 253 atataacc--------------------ttcttaaattttgtgaagaaatttcatcaaaa 214
Query: 472 tttgtattggttaggccttcatttccatttattttggtcttaaatcaatgcaggccatag 531
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 213 tttgtattgattaggccttcatttccatttattttggtcttaaatcaatgcaggctatag 154
Query: 532 acattttcctttctttggaagagcatagctaacaggttactaggtatttttggcagaaaa 591
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 153 acattttcctttctttggaagagcataactaacaggttactaggtatttttggcagaaaa 94
Query: 592 atacaaaacattatgtttgaaaaccaccattgcctttattttctattttaatgaataata 651
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 93 atacaaaacattatgtttgaaaaccatcattgcctttattttctattttaatgaataata 34
Query: 652 aaatcattccctaaca 667
| ||||||||||||||
Sbjct: 33 agatcattccctaaca 18
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1065
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1055
Effective search space: 693135
Effective search space used: 693135
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no489_c12.g1 MSMg01no489_c12.g1 CHROMAT_FILE:
MSMg01no489_c12.g1 PHD_FILE: MSMg01no489_c12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:17 2005
(626 letters)
>mm_chr12_67865781_67866805
Length = 1025
Score = 1135 bits (587), Expect = 0.0
Identities = 617/627 (98%), Gaps = 4/627 (0%)
Strand = Plus / Plus
Query: 1 aagttgatgttgaatgaaagaaaaaattcattcaattattgtaaatacaatatgcatgtg 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 202 aagttgatgttgaatgaaagaaaaa-ttcattcaattattgtaaatacaatatgcatgtg 260
Query: 61 tttaaccaatatattaattaattaattttatattgagttttagaaatttaatataaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttaaccaatatattaattaattaattttatattgagttttagaaatttaatataaaata 320
Query: 121 gaagaaaaactgggagcctgtatctcatatcaaacacattatatgacagtcacccaagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagaaaaactgggagcctgtatctcatatcaaacacattatatgacagtcacccaagga 380
Query: 181 taagtaaaattaggaaagtatggtatgatataattcctttaacaactaaatag-cgctga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 381 taagtaaaattaggaaagtatggtatgatataattcctttaacaactaaatagtc-ctga 439
Query: 240 gaactttgttaaatctaacttggattttattatgaaaacaggagtaagcaataggcctcc 299
||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaaaattgtgaaatctaacttggattttattatgaaaacaggagtaagcaataggcctcc 499
Query: 300 caatgcttgtgaagagcctttgtggaaagtaactgctgaggcccaaggaagctctgggca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 caatgcttgtgaagagcctttgtggaaagtaactgctgaggcccaaggaagctctgggca 559
Query: 360 atttaaacacttccacctgccccttctgagtcttcatgttgatactatagttttattgtg 419
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atttaaacactttcacctgccccttctgagtcttcatgttgatactatagttttattgtg 619
Query: 420 agcttcaggtttattttgagctcattttatttcaccagatccaagtgctaatttctaaaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 620 agcttcaggtttattttgagctcattttatttcaccagatccaagtgctaatt-ctaaaa 678
Query: 480 ctgttcttcctccagaggccccagtgatcagttagattagattgaatgccaatccccttc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ctgttcttcctccagaggccccagtgatcagttagattagattgaatgccaatccccttc 738
Query: 540 ctctgggtcccatggttagtgttaccaggtgctgtgggaatagtggagagaaaaaagaaa 599
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 739 ctctgggtcccatggttagtgttactagctgctgtgggaatagtggagagaaaaaagaaa 798
Query: 600 aacaaagagggagagaaaaggacaaca 626
|||||||||||||||||||||||||||
Sbjct: 799 aacaaagagggagagaaaaggacaaca 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1025
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1015
Effective search space: 625240
Effective search space used: 625240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
