Query= MSMg01no490_c07.b1 MSMg01no490_c07.b1 CHROMAT_FILE:
MSMg01no490_c07.b1 PHD_FILE: MSMg01no490_c07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:38 2005
(690 letters)
>mm_chr12_15511451_15512540
Length = 1090
Score = 986 bits (510), Expect = 0.0
Identities = 546/558 (97%)
Strand = Plus / Plus
Query: 133 ctcaatgttgtttctgagagatcaatgggggctgaaaaggacacttcattctggcatggt 192
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 333 ctcaatgttgtttctgagagatcaatgggggctgaaaaggacacttcatcctggcatggt 392
Query: 193 gggcataacaaaaatgtctaccaaagttcatgaaacctaaatagttctagggttcccaca 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gggcataacaaaaatgtctaccaaagttcatgaaacctaaatagttctagggttcccaca 452
Query: 253 atcataccagactacaattatctatgatttggctgcatacaataaactaacagatggaaa 312
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 atcatcccagactacaattatctatgatttggctgcatacaataaactaacagatggaaa 512
Query: 313 catcactgtacccaaatgcatatacacacaattcaataatatctcttagctagcaacaaa 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 catcactgtacccaaatgcatatacacacaattcaataatatctcttagctagcaacaaa 572
Query: 373 atctcttcttacattttttcttcctgtatcctattttcttagaacaccagttttcaaaac 432
||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 573 atctcttcttacactttttcttcctgtatcctattttctcagaacactagttttcaaaac 632
Query: 433 aatacatttaagcaggatcttccaaatgttcatgtaaaccaggaaaccatgtatttgtct 492
|||||||||||||||||||||||||||||||| | ||||||||||||| ||| |||||||
Sbjct: 633 aatacatttaagcaggatcttccaaatgttcaagaaaaccaggaaaccgtgtctttgtct 692
Query: 493 ttgtttggaatatagattatccatgtaatcacttgagatgtggtcttttatgatgcataa 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 ttgtttggaatatagattatccatgtaatcacttgagatgtggtcttttatgatgcataa 752
Query: 553 gggtcctgaatacaaagacacgggtgtttgacagaaagacacaacaaaggcacagagaga 612
||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 753 gggtcctgaatacaaagacactggtgtttgacagaaagacacagcaaaggcacagagaga 812
Query: 613 aggctatctgaagagatataatttataatcatctttacttaaaaaatagaaggtcaatga 672
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 813 aggctatctgaagagatataatttataatcatctttacttaaacaatagaaggtcaatga 872
Query: 673 tggtcagccacaccagaa 690
||||||||||||||||||
Sbjct: 873 tggtcagccacaccagaa 890
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space: 734400
Effective search space used: 734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_c07.g1 MSMg01no490_c07.g1 CHROMAT_FILE:
MSMg01no490_c07.g1 PHD_FILE: MSMg01no490_c07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:38 2005
(572 letters)
>mm_chr12_15526900_15527873
Length = 974
Score = 1060 bits (548), Expect = 0.0
Identities = 564/574 (98%), Gaps = 9/574 (1%)
Strand = Plus / Minus
Query: 1 agctgggttgaagcagagtgaagcagagttcagccaaccagccgtggccctgactgagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959 agctgggttgaagcagagtgaagcagagttcagccaaccagccgtggccctgactgagat 900
Query: 61 aagaggcatcacaggatccctgctgccacgccttccatttctgacatctggtggatgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 aagaggcatcacaggatccctgctgccacgccttccatttctgacatctggtggatgcca 840
Query: 121 ctgcagaggcactgataacccagttcctgctccctagagaacatgatctgacagtgtatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 ctgcagaggcactgataacccagttcctgctccctagagaacatgatctgacagtgtatt 780
Query: 181 ctgaattctttttttttttttttaagaatcatagtcaagaatactgacttatttttagct 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 ctgaa-------tttttttttttaagaatcatagtcaagaatactgacttatttttagct 727
Query: 241 ggattttgttcctttctgctgcttagtaaggattcctttgaaagacaattttgcactacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 ggattttgttcctttctgctgcttagtaaggattcctttgaaagacaattttgcactacc 667
Query: 301 cagacccttctgatttaagtgtcacataatatatgggaacaaatctaggcggtcatggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 cagacccttctgatttaagtgtcacataatatatgggaacaaatctaggcggtcatggaa 607
Query: 361 tcgtgattaaatattttagaagagaagataatagttctccaataaagaaaagacattaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 tcgtgattaaatattttagaagagaagataatagttctccaataaagaaaagacattaag 547
Query: 421 atcaattcacagtatttgccatatgatttttttt--cttgcaatcttagaaagtagatca 478
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 546 atcaattcacagtatttgccgtatgattttttttttcttgcaatcttagaaagtagatca 487
Query: 479 gccatagtgaaagcataagctagagtgggcagaagcgggtgctgtgtagctctgtgtttc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gccatagtgaaagcataagctagagtgggcagaagcgggtgctgtgtagctctgtgtttc 427
Query: 539 ctacagtagaaaatgaccacattggttgatttag 572
||||||||||||||||||||||||||||||||||
Sbjct: 426 ctacagtagaaaatgaccacattggttgatttag 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 974
Length adjustment: 10
Effective length of query: 562
Effective length of database: 964
Effective search space: 541768
Effective search space used: 541768
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
