Query= MSMg01no491_a02.b1 MSMg01no491_a02.b1 CHROMAT_FILE:
MSMg01no491_a02.b1 PHD_FILE: MSMg01no491_a02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:46 2005
(708 letters)
>mm_chr12_64338629_64339737
Length = 1109
Score = 1288 bits (666), Expect = 0.0
Identities = 696/706 (98%), Gaps = 2/706 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaggtagttttcttttgcttcagttgtgttagtataacgagggcttgtagtagg 64
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 204 gaattcaaggtagttttcttttgcttcagttgtgttagtataacgagggattgtagtagg 263
Query: 65 atagctgtgctcagcaggtaccatactgccttgacttattttgattatgttcttttttct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atagctgtgctcagcaggtaccatactgccttgacttattttgattatgttcttttttct 323
Query: 125 tttcattttt-attggttattttatttacatttcaaatgttatcccccttcccactttcc 183
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttcattttttattggttattttatttacatttcaaatgttatcccccttcccactttcc 383
Query: 184 ctgccacaagcccccatcctctcctccctccccctgcctctatgagggtactcctgcatg 243
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 384 ctgccacaagcccccatcccctcctccctccccctgcctctatgagggtactcctgcacg 443
Query: 244 tacactagtgtttccctatcttgagtcatcaagcctccgtattagactggcctttagcca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tacactagtgtttccctatcttgagtcatcaagcctccgtattagactggcctttagcca 503
Query: 304 tctatttgtctttggatattactgttctagcaggtatcaggaagggggacctaacctgga 363
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tctatttgtccttggatattactgttctagcaggtatcaggaagggggacctaacctgga 563
Query: 364 tgttcctggagagctggcctctgatgggcagccttgggttggaaaatgaaactcattggg 423
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 564 tgttcctggagagctggcctctgatgggcagccttgggttggacaatgaaactcattggg 623
Query: 424 caaaacaagtctgagagcagctgagtatgccctaggggataaagtagacaagtgaggtgg 483
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 624 caaaacaagtctgagagcagctgagtatgccctaggggacaaagtagacaagtgaggtgg 683
Query: 484 ggggagggttctaacctggatattcctggtgctgtgggcctagtacagatgggcagtcca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ggggagggttctaacctggatattcctggtgctgtgggcctagtacagatgggcagtcca 743
Query: 544 aggtcatgcttaatcttacttcataaattcatagtaaattctaacatacatttatttcgt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aggtcatgcttaatcttacttcataaattcatagtaaattctaacatacatttatttcgt 803
Query: 604 ttatagtatgtattattctctgtgattaaaaaatcattgatttgcatacttttcaatctt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gcatagtatgtattattctctgtgattaaaaaatcattgatttgcatacttttcaatctt 863
Query: 664 tcatttgctatttcttcctttttt-aatttgaaatacattttcatg 708
|||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 864 tcatttgctatttcttcctttttttaatttgaaatacattttcatg 909
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 708
Length of database: 1109
Length adjustment: 10
Effective length of query: 698
Effective length of database: 1099
Effective search space: 767102
Effective search space used: 767102
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no491_a02.g1 MSMg01no491_a02.g1 CHROMAT_FILE:
MSMg01no491_a02.g1 PHD_FILE: MSMg01no491_a02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:46 2005
(647 letters)
>mm_chr12_64468802_64469848
Length = 1047
Score = 1251 bits (647), Expect = 0.0
Identities = 647/647 (100%)
Strand = Plus / Minus
Query: 1 acattgtaaacacaagtttgctgtgggattcaccaccttcaccataatattcaagtgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 acattgtaaacacaagtttgctgtgggattcaccaccttcaccataatattcaagtgcag 788
Query: 61 aatgagcctcttgctctcttaaacttttcctttttaaatatcattgtagtgattaagggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 aatgagcctcttgctctcttaaacttttcctttttaaatatcattgtagtgattaagggc 728
Query: 121 atctgtgatattgtcggaacatatgtacaaacttttcaattttattttagtgacaatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 atctgtgatattgtcggaacatatgtacaaacttttcaattttattttagtgacaatgaa 668
Query: 181 tatcacagtttaaatttttcataatggtctcctgtcttttcaaacaaacactttggatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tatcacagtttaaatttttcataatggtctcctgtcttttcaaacaaacactttggatat 608
Query: 241 gtcaacattataatttgtacattctttgagtaaattcactagctattatttgtgtagctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gtcaacattataatttgtacattctttgagtaaattcactagctattatttgtgtagctt 548
Query: 301 ttactttgtttgctacaatacttattaacttatttatattctttgcatgtatcactgcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ttactttgtttgctacaatacttattaacttatttatattctttgcatgtatcactgcct 488
Query: 361 gttttttatgcttgtgtgtgtgtacatgctgtcatcttttctgaaaattttcctgcagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gttttttatgcttgtgtgtgtgtacatgctgtcatcttttctgaaaattttcctgcagca 428
Query: 421 tttttctacagatggtttacatgtgcagatccagttgggaatcatagccctaattcatct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tttttctacagatggtttacatgtgcagatccagttgggaatcatagccctaattcatct 368
Query: 481 ttgattaatccaacctgaggctgatactaagtgtttttctcatttgatccaccttgtttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttgattaatccaacctgaggctgatactaagtgtttttctcatttgatccaccttgtttc 308
Query: 541 ttttttgtgaagcagaatttcttcctgagtggagttatcccatgtacctggactgaatgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ttttttgtgaagcagaatttcttcctgagtggagttatcccatgtacctggactgaatgg 248
Query: 601 gtgaaaaaccacaaggatacttatctatctaggtttacgggaacctg 647
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gtgaaaaaccacaaggatacttatctatctaggtttacgggaacctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
