XXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGAATCCGCGGAATTCATTCA
TGCTTTCCGCAACGTGCACCTCCACTTCAACGTGGTAAGGGCAGTGCTTG
TGCTGTAAGATGATTCTTAAATAAAGAATTCAAGTTTAATAAAGCATTGC
AATTTTTTTTTTCTTCCTGGCTCCATCTTGTCAAAACACAATTCCAGCAT
GGGCAGAGACAGGCATGAAGTCCCATGCCTACCTGGGGAGTCATAGTCTG
TTGATGGCTGCTGGGAGAAGGAGTCGGTTTTCCTCAGAGATGTAGCTGGA
GAGTCTACATCTGCTCCAGTACAGGGTCCTGTATCTATGTCCATGCTGAA
AGCACACTGAAAAAAGATGGACTCTTTTTTTTTTTTAAAGATTTATTTAT
TGTATGTAAATACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATC
AGATTTCATTTCAGGTGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGA
ACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTATCCGTTGAGCCATCT
CGCCAGCCCAAAGATGGACTCTTAAAAGAAGGAAAAAAAAAAAACCATGA
AATTTGGAAAAAATAGTGATTGGGGGAATGGGAGAGGAATTGGAAGAGAG
CGAATGGGAAGTACGTCTGATTAAAGCATATTATATACATGTGTAAAATT
CTCAACCAATACAACATGAAAATAAATAGCATTGTGAGAAACCACCCTAG
A

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTGTGGACTGTAACTTGTGTATTCTGTATGGGTTCT
TTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCATCCTTCCTTCCTTC
CTTCCTTCCTTCCTTTTCTTCTTCTAATATTCACTTATTAGTGAGTACAT
ACCATGCATGTCCTTTTGGACCCGACTTGCCTCACTCAGGATGATATTTT
CTAGTTCCATCCATTTGCCTGCAAAACTCAGGATGTCCTCATTCTTAATA
GCTGAGTAGTACTCCATTGTGTAAATGAGCCACATTTTCTGTATCCATTC
TTCTGTTCTGGGACATCTTCTGGCTATCACAAATAAGGCCACTATGAACA
TAGTGGAACAAGTGCCCTTGTGGCATGGTGGGGCATGTTCTTGATATATT
CCCAAGAGTGGTATTGCAGGGTCTGCAGGTAGATCTATTTCCAACTTTCT
GAGGAATTTCCAGATTAATTTCCAGATTTGTTGTACCAGTATGCAATCCC
ACCAGCAATGAAGGAGTGTTCCTCTTTCTCTACATCCTCTCCAACATGTG
TTGTCACCTGAGGTTTGATCTTAACCATTCTGACTGGTGTAAGGGGGGAA
TTCAGGGTCATTTTTGATTTGCATTTCTATGATTACTAAAGAACTTGAAC
ATTTCTTTTAGTGGTTTCTCAGCCATTCTAGATTCCTCAGTTGTGGAATC
TTGGGTTA

Query= MSMg01no491_d24.b1 MSMg01no491_d24.b1 CHROMAT_FILE:
MSMg01no491_d24.b1 PHD_FILE: MSMg01no491_d24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:06 2005
         (662 letters)



>mm_chr12_118023281_118024342
          Length = 1062

 Score = 1280 bits (662), Expect = 0.0
 Identities = 662/662 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgcacctccacttcaacgtggtaagggcagtgcttgtgctgtaagatgattcttaaataa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcacctccacttcaacgtggtaagggcagtgcttgtgctgtaagatgattcttaaataa 260

                                                                       
Query: 61  agaattcaagtttaataaagcattgcaattttttttttcttcctggctccatcttgtcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaattcaagtttaataaagcattgcaattttttttttcttcctggctccatcttgtcaa 320

                                                                       
Query: 121 aacacaattccagcatgggcagagacaggcatgaagtcccatgcctacctggggagtcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacacaattccagcatgggcagagacaggcatgaagtcccatgcctacctggggagtcat 380

                                                                       
Query: 181 agtctgttgatggctgctgggagaaggagtcggttttcctcagagatgtagctggagagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtctgttgatggctgctgggagaaggagtcggttttcctcagagatgtagctggagagt 440

                                                                       
Query: 241 ctacatctgctccagtacagggtcctgtatctatgtccatgctgaaagcacactgaaaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctacatctgctccagtacagggtcctgtatctatgtccatgctgaaagcacactgaaaaa 500

                                                                       
Query: 301 agatggactcttttttttttttaaagatttatttattgtatgtaaatacactgtagctgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agatggactcttttttttttttaaagatttatttattgtatgtaaatacactgtagctgt 560

                                                                       
Query: 361 cttcagacacaccagaagagggcatcagatttcatttcaggtggttgtgagccaccatgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttcagacacaccagaagagggcatcagatttcatttcaggtggttgtgagccaccatgt 620

                                                                       
Query: 421 ggttgctgggatttgaactcaggacctttggaagagcagtcagtgctcttatccgttgag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggttgctgggatttgaactcaggacctttggaagagcagtcagtgctcttatccgttgag 680

                                                                       
Query: 481 ccatctcgccagcccaaagatggactcttaaaagaaggaaaaaaaaaaaaccatgaaatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccatctcgccagcccaaagatggactcttaaaagaaggaaaaaaaaaaaaccatgaaatt 740

                                                                       
Query: 541 tggaaaaaatagtgattgggggaatgggagaggaattggaagagagcgaatgggaagtac 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tggaaaaaatagtgattgggggaatgggagaggaattggaagagagcgaatgggaagtac 800

                                                                       
Query: 601 gtctgattaaagcatattatatacatgtgtaaaattctcaaccaatacaacatgaaaata 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gtctgattaaagcatattatatacatgtgtaaaattctcaaccaatacaacatgaaaata 860

             
Query: 661 aa 662
           ||
Sbjct: 861 aa 862


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space:   685904
Effective search space used:   685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)