Query= MSMg01no491_i10.b1 MSMg01no491_i10.b1 CHROMAT_FILE:
MSMg01no491_i10.b1 PHD_FILE: MSMg01no491_i10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:28 2005
(542 letters)
>mm_chr12_55184911_55185849
Length = 939
Score = 729 bits (377), Expect = 0.0
Identities = 391/397 (98%), Gaps = 3/397 (0%)
Strand = Plus / Minus
Query: 1 atgagtcctgggctcagtcaagcttcctcaaagcctttagtttcctagcctcttgcttgc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 394 atgagtcctgggctcagtcaagcttccccaaagcctttagtttcctagcctcttgcttgc 335
Query: 61 tcctagagttatccagcctacaccagccgcatttcccccttattcttgccttaggtacct 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 334 tcctagagttatccagcctacaccagccgcatttcccccttattcttgctttaggtacct 275
Query: 121 tcattaagaccaagaacactttcatctttgatgaaagggtgtttcattaactgttcttat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tcattaagaccaagaacactttcatctttgatgaaagggtgtttcattaactgttctta- 216
Query: 181 gttgttcatttacctgagagccccaggaatttgcctgtctctgcctcttcagctttaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 --tgttcatttacctgagagccccaggaatttgcctgtctctgcctcttcagctttaaga 158
Query: 241 ttacaagtataaaccatcacccttaacttggaaataatctgggctttgtggctagaactg 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ttataagtataaaccatcacccttaacttggaaataatctgggctttgtggctagaactg 98
Query: 301 aggtctaaacattttgtctactgaatcacctccctaacccttgactaacacgtgttacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 aggtctaaacattttgtctactgaatcacctccctaacccttgactaacacgtgttacaa 38
Query: 361 cgaggttggtgatagtggcttatctggtatgttagtt 397
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 cgaggttggtgatagtggcttatctggtatgttagtt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 939
Length adjustment: 10
Effective length of query: 532
Effective length of database: 929
Effective search space: 494228
Effective search space used: 494228
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no491_i10.g1 MSMg01no491_i10.g1 CHROMAT_FILE:
MSMg01no491_i10.g1 PHD_FILE: MSMg01no491_i10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:28 2005
(463 letters)
>mm_chr12_55036968_55037830
Length = 863
Score = 841 bits (435), Expect = 0.0
Identities = 456/463 (98%)
Strand = Plus / Plus
Query: 1 ataaattaaattgaaatctgtaaagcaacatagtattgggtgattgatcttgttgattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataaattaaattgaaatctgtaaagcaacatagtattgggtgattgatcttgttgattcc 260
Query: 61 tggcatgcccaggtgtggcttatgcatccaagatccctggtcactgactgttgcttcaca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcatgcccaggtgtggcttatgcatccaagatccctggtcactgactgttgcttcacg 320
Query: 121 atctgcaacaaagcctgaaagaagttttcagttactgggctgtgtgtccatcactagatc 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 atctgcaacaaagcctgaaagaagttttcagttactgggctgtgtgttcatcactagatc 380
Query: 181 acagaaacctgaggccatcagttgggactcttgaagttttatgcttgtcaaagcagcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagaaacctgaggccatcagttgggactcttgaagttttatgcttgtcaaagcagcaaa 440
Query: 241 tgttgagttgtatttttgtgggtagactcaaggccaggcaaaatgacaccaagcccaccg 300
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggttgagttgtaccattgtgggtagactcaaggccaggcaaaatgacaccaagcccaccg 500
Query: 301 aattctctctgggaatgaaggaaactaaattaaaacatggcaaaagtgcaccatggattt 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 aattctctctgggaatgaaggaaactaaattaaaacgtggcaaaagtgcaccatggattt 560
Query: 361 taagctcaccaatgagcagaaacccatctattataaactcagctctattataaacccatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taagctcaccaatgagcagaaacccatctattataaactcagctctattataaacccatc 620
Query: 421 tattatatagctcaggccttgagctagtgtttctcattctaca 463
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tattatatagctcaggccttgagctagtgtttctcattctaca 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
