Query= MSMg01no491_n06.b1 MSMg01no491_n06.b1 CHROMAT_FILE:
MSMg01no491_n06.b1 PHD_FILE: MSMg01no491_n06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:51 2005
(399 letters)
>mm_chr12_26292743_26293540
Length = 798
Score = 725 bits (375), Expect = 0.0
Identities = 390/395 (98%), Gaps = 1/395 (0%)
Strand = Plus / Plus
Query: 1 gggtgggtggggagatcttgaactgtgtgtttttgtcaaggttacatttctgctactgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gggtgggtggggagatcttgaactgtgtgtttttgtcaaggttacatttctgctactgat 260
Query: 61 cccagcccagctctcctctacctacgctaacttctgacttccttttcctttcttctttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccagcccagctctcctctacctacgctaacttctgacttccttttcctttcttctttct 320
Query: 121 ttttccttcccttccttttatgttgtcatgtttccatgtgtgcatttgtaaagtagtggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttccttcccttccttttatgttgtcatgtttccatgtgtgcatttgtaaagtagtggg 380
Query: 181 tttcatgatggcgttttcatacatgtgtgcctttatgcttagttttcactgattcccctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcatgatggcgttttcatacatgtgtgcctttatgcttagttttcactgattcccctt 440
Query: 241 ccctaatgcctttccttgtgtccctgccactctgtatctgagtcccttccttctcccaat 300
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccctaacgcctttccacgtgtccctgccactctgtatctgagtcccttccttctcccaat 500
Query: 301 taaattctgtttttttctgatcacttctttcttgttagcatctcccttaaaggactttcc 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 501 taaattct-tttttttctgatcacttctttcttgttagcatctcccttaaaggtctttcc 559
Query: 361 cactctctctctctctctctctctctctctctctc 395
|||||||||||||||||||||||||||||||||||
Sbjct: 560 cactctctctctctctctctctctctctctctctc 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 798
Length adjustment: 9
Effective length of query: 390
Effective length of database: 789
Effective search space: 307710
Effective search space used: 307710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no491_n06.g1 MSMg01no491_n06.g1 CHROMAT_FILE:
MSMg01no491_n06.g1 PHD_FILE: MSMg01no491_n06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:51 2005
(348 letters)
>mm_chr12_26465391_26466138
Length = 748
Score = 650 bits (336), Expect = 0.0
Identities = 345/348 (99%), Gaps = 1/348 (0%)
Strand = Plus / Minus
Query: 1 tatagaaaggaaaatttggaaaggcctcaaaccttgaagggaaggagctgggtggtcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tatagaaaggaaaatttggaaaggcctcaaaccttgaagggaaggagctgggtggtcagt 350
Query: 61 agcaagctaaaatctaattttcagtgcagaagagagtgggtggttggactagcttcagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 agcaagctaaaatctaattttcagtgcagaagagagtgggtggttggactagcttcagag 290
Query: 121 gatcctgggcacaagggtttcctactggaagcctgcagaggaagaggaagaaaggggcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gatcctgggcacaagggtttcctactggaagcctgcagaggaagaggaagaaaggggcct 230
Query: 181 ggaccatggataccttggaccctctagatcagaagttctcaatc-gggggggggggggaa 239
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 229 ggaccatggataccttggaccctctagatcagaagttctcaatcggggggggggggggaa 170
Query: 240 ctcccttggtagttcttcaactttttcacagggattgcctaagaccatcgacatatcaga 299
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 ctcccttggtagttcaacaactttttcacagggattgcctaagaccatcgacatatcaga 110
Query: 300 tatttacaatatgattcataacagtagcaaaattacagttatgaagta 347
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 tatttacaatatgattcataacagtagcaaaattacagttatgaagta 62
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
