NTTACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCACTGTGTTCGCCAGGATGTGCCTAGTTGCAGTTTTCTGACAT
AGCCTCCCAAATACTCAGATTGCAGACCTGCATCACCTACTATGCCTAGT
TTTCTTTGTAGAGTTTGATTATTTAGATTCTCTAGCAGTGGCTTTATTCT
CAGAAAGTTTATAAATTGTTGATTTGTCCATTTTCTTTTTTCTGCCACTT
TTGCTTTCTTTGAGGCTACAATCAATAGAAACGTGGAGCTGTCATCTAAT
TGGGCTTCTTTTCATTAGTGTGCATGCTACATCTTTTCCACTCCTTATTT
CAGTCTTTCCGTAACCTGTGTTTTACACACACACACACACACACACACAC
ACACACACACACACACACACACACACACACACACACACACACACTTACTG
CTTTTGCTTTCTGGTCTGATAGTTTTCTGTATACAGAGGCAGTTAGTGCA
TTCATACCACATGTAACCTCTTGTTATTTGGAGCTTACACAGACCCATCT
GGACATCTGCTTTCTATTTGCCCCATCTGTCCTGTGTGCCTTCCTTATTT
GTTTGTTTGGTTTTTGTTTTTTGGTTTTTTTTCCAGACAGGGTTTCTCTG
TGTTGCTCTGGCTGGCCTGGAATTGTGAGTTTTGAGCCTGCCTGTTTAAC
ATT

NAACATGCAGTGGGAGCCTGGCGGCGCCTGGCTTCAACAATAGGTGAACT
ATAGAAGTTTCGCGAACATCTATGACCATCACATATGTTCTGTGCCCATT
ATTCTGTAGCTATTGCTTATCTGTATGACTTCTTGTAGGGCACTTAGTAC
ACACTTTGCCTACCATGCAGAAAGCACTGGGTTCAACCCAACGCAGCACC
ATAGAAATAGGATATGGTGCAATTCTGTACTTCTAGTATTTATGAGGCAG
AGGTAGACCCAGACTCAAATTATGTTTGAAAATAAAACCCCCTAAATATG
CAATCCTACTGTTTTTCAAAACACAAGGCTTGGTATCATTAACAGTAACT
TTATTCTCTAGCAGGTCATTTCTCTACTGCTTCAGTATTTTCCTCTCAGA
GAACACAAGTTTTAGAACTGGATCACTTGGCCCTTCCTCTTCTTGTCGCC
TCCCAGTTCAAAATGCTTGCATCTCTTAATGGCCAGCATCCTCTTGGATC
TGCAGTTGGGCTCAACACACTCAAGCCTGAGCACAATCTTCTTTGTGGTT
TTGGCCTTCTTTCGAAAGATTGGCTTTGTCTGCCCACCGTAGCCACTCTG
CTTGCGATCGTAGCGCCGCTTTCCTTGGGCATACAGGGAATCCTTGCCCT
TCTTATACTGGGTCACTTTGTGAGGCTGATGCTTGCCACATTTCTTA

Query= MSMg01no492_m23.b1 MSMg01no492_m23.b1 CHROMAT_FILE:
MSMg01no492_m23.b1 PHD_FILE: MSMg01no492_m23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:08 2005
         (573 letters)



>mm_chr12_70435528_70436500
          Length = 973

 Score =  893 bits (462), Expect = 0.0
 Identities = 497/524 (94%), Gaps = 25/524 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtgcctagttgcagttttctgacatagcctcccaaatactcagattgcagacctgcatca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gtgcctagttgcagttttctgacatagcctcccaaatactcagattgcagacctgcatca 440

                                                                       
Query: 61  cctactatgcctagttttctttgtagagtttgattatttagattctctagcagtggcttt 120
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cccactatgcctagttttctttgtagagtttgattatttagattctctagcagtggcttt 380

                                                                       
Query: 121 attctcagaaagtttataaattgttgatttgtccattttcttttttctgccacttttgct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 attctcagaaagtttataaattgttgatttgtccattttcttttttctgccacttttgct 320

                                                                       
Query: 181 ttctttgaggctacaatcaatagaaacgtggagctgtcatctaattgggcttcttttcat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttctttgaggctacaatcaatagaaacgtggagctgtcatctaattgggcttcttttcat 260

                                                                       
Query: 241 tagtgtgcatgctacatcttttccactccttatttcagtctttccgtaacctgtgtttta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 259 tagtgtgcatgctacatcttttccactccttatttcagtctttccgtaacctgtgtttt- 201

                                                                       
Query: 301 cacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca 360
                                  |||||||||||||||||||||||||||||||||||||
Sbjct: 200 -----------------------acacacacacacacacacacacacacacacacacaca 164

                                                                       
Query: 361 cacacacacttactgcttttgctttctggtctgatagttttctgtatacagaggcagtta 420
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 163 cacacacacttactgcttttgctttctggtctgataattttctgtatacagaggcagtta 104

                                                                       
Query: 421 gtgcattcataccacatgtaacctcttgttatttggagcttacacagacccatctggaca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gtgcattcataccacatgtaacctcttgttatttggagcttacacagacccatctggaca 44

                                                       
Query: 481 tctgctttctatttgccccatctgtcctgtgtgccttccttatt 524
           |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 43  tctgcttt-tatttgccccatctgtcctgtgtgccttccttatt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 93
Number of extensions: 32
Number of successful extensions: 32
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space:   542169
Effective search space used:   542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)