ATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTAACTATCCTGAGAAAGATAATAAAGACTTTGTGATAGTGATTA
AAAGAAAAACATAAAATCTATAATTTCAACACATCAGATGAGAGAATATA
TGATAATATATTCTTGCATTTTTGTTTCATTTGATGTGTGATATCATTTT
ATCATACGTTCTGTTCACTTCCAGAGTATTCCCTTTCTTTTTTTTTTTTA
AGATACAACATCGTAGGGATGAAAACAGAAAAACTGAGTTAAAATGGGCC
ACATTCTCATTTTATCAGTACTCTCATTTGAAAACAAAAGCCACTGTTTA
ATTGGAAAGTTTTCCACATGTAACAAATGATATAGTGGAGGAAAACTCTC
AGGGAAATTATTAGATACACACAGAAAATGCAAACTTTAATTATTGAATC
CTACTATTTCTTCGTCTTAGTCAATGTTCCCAGTCAATGATGAGCAAGTT
CAATCCCTCGATGTCAACAATTGTACATTATGCCAACAAATGAGCCTGCC
CTTACATTCATTTATACATATCCAGATGTTTTGAGTTACTCAGGAACATC
ACTGATCTTATTTGAACAAAATAGTATGTACATGTTGGCAATATTGACCT
CCCCAGTCAACACAAAGTCTGCGCTTCATCCCTTAATGTGGTTCAGATGT
TGCCAAGTGTTAACGTGCTCACTGAATTACACTCACATG

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTGGTTTCTCCATCTATGGTAATT
GAGAGTTTGGCTGGGTATAGTAGCCTGGGCTGGAATTTGTGTTCTCTTAG
TGTCTGTATAACATCTGTCCAGGCTCTTCTGGCTTTCATAGTCTCTGGTG
AAAAATCTGGTGTAATTCTGATAGGCTTGCCTTTGTATGTTACTTGACCT
TTTTCCCTTACCGCTTTTAGTATTCTATCTTTATTTAGTGCATTTGTTGT
TCTGATTATTATGTGTCGGGAGGAATTTCTTTTCTGGTCCAGTCTATTTG
GAGTTCTGTAGGCTTCTTGTATGTTCATAGGTATCTCTTTCTTTATATTT
GGGAAGTTTTCTTCAATAATTTTGTTGAAGATGTTTGCTGGTCCTTTGAG
TTGAAAATCTTCATTCTCATCCACTCCTATTATCCGTAGGTTTGGTCTTC
TCATTGTGTCCTGGATTTCCTGGATATTTTGAGTTAGGATCTTTTTGCAT
TTTCCATTTTCTTTGATTGTTGTGCCGATGTTCTCTATGGAATCTTCTGC
ACCTGAGATTCTCTCTTCCATCTCTTGTATTCTGTTGCTGATGCTCAAAT
CTATGGTTCCAGATTTCTTTCCTAGGGTTTCTATCTCTAGTGTTGCCTCA
CTTTGAGTTTTCTTTATTGTTTCTACTTCCCTTTTTAGGNCTAGGATGGT
TTTGTCATTTCATCACC

Query= MSMg01no493_d21.b1 MSMg01no493_d21.b1 CHROMAT_FILE:
MSMg01no493_d21.b1 PHD_FILE: MSMg01no493_d21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:42 2005
         (646 letters)



>mm_chr12_97727018_97728064
          Length = 1047

 Score = 1189 bits (615), Expect = 0.0
 Identities = 636/643 (98%), Gaps = 1/643 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctaactatcctgagaaagataataaagactttgtgatagtgattaaaagaaaaac 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 gaattctaactatcctgagaaagataataaagactttgtgatagtgattaaaagaaaaac 788

                                                                       
Query: 65  ataaaatctataatttcaacacatcagatgagagaatatatgataatatattcttgcatt 124
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 787 ataaaatctataatttcaacacaccagatgagagaatatatgataatatattcttgcatt 728

                                                                       
Query: 125 tttgtttcatttgatgtgtgatatcattttatcatacgttctgttcacttccagagtatt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 tttgtttcatttgatgtgtgatatcattttatcatacgttctgttcacttccagagtatt 668

                                                                       
Query: 185 ccctttc-ttttttttttttaagatacaacatcgtagggatgaaaacagaaaaactgagt 243
           ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 667 ccctttctttttttttttttaagatacaaaatcgtagggatgaaaacagaaaaactgagt 608

                                                                       
Query: 244 taaaatgggccacattctcattttatcagtactctcatttgaaaacaaaagccactgttt 303
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 607 taaaatgggccacattctcattttatcggtactctcatttgaaaacaaaagccactgttt 548

                                                                       
Query: 304 aattggaaagttttccacatgtaacaaatgatatagtggaggaaaactctcagggaaatt 363
           ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 aattggaaaatttttcacatgtaacaaatgatatagtggaggaaaactctcagggaaatt 488

                                                                       
Query: 364 attagatacacacagaaaatgcaaactttaattattgaatcctactatttcttcgtctta 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 attagatacacacagaaaatgcaaactttaattattgaatcctactatttcttcgtctta 428

                                                                       
Query: 424 gtcaatgttcccagtcaatgatgagcaagttcaatccctcgatgtcaacaattgtacatt 483
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 427 gtcaatgttcccagtcaatgatgagcaagtttaatccctcgatgtcaacaattgtacatt 368

                                                                       
Query: 484 atgccaacaaatgagcctgcccttacattcatttatacatatccagatgttttgagttac 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 atgccaacaaatgagcctgcccttacattcatttatacatatccagatgttttgagttac 308

                                                                       
Query: 544 tcaggaacatcactgatcttatttgaacaaaatagtatgtacatgttggcaatattgacc 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tcaggaacatcactgatcttatttgaacaaaatagtatgtacatgttggcaatattgacc 248

                                                      
Query: 604 tccccagtcaacacaaagtctgcgcttcatcccttaatgtggt 646
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tccccagtcaacacaaagtctgcgcttcatcccttaatgtggt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1047
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1037
Effective search space:   659532
Effective search space used:   659532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)