Query= MSMg01no493_n23.b1 MSMg01no493_n23.b1 CHROMAT_FILE:
MSMg01no493_n23.b1 PHD_FILE: MSMg01no493_n23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:34 2005
(515 letters)
>mm_chr12_92452657_92453571
Length = 915
Score = 884 bits (457), Expect = 0.0
Identities = 491/511 (96%), Gaps = 14/511 (2%)
Strand = Plus / Plus
Query: 5 gaattcccatgatattctgtccaacaagcccaggtgacttttaacacgttcgctcctata 64
|||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 205 gaattcccatgatagactgtccaacaagcccaggtgacttttaacacgctcgctcctata 264
Query: 65 agcagaagcaagctaggtaaaacatcagatagaagggtaagtcggactcatggagggaag 124
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 265 agcagaagcaagctaggtaaaacatcagatagaagggcaagtcggactcatggagggaag 324
Query: 125 agacaactgctagtgtccacatgcagacactggaaccccgagagactgcaaagggacgtg 184
|||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 325 agacaactgctagtgtcc--------------gaaccctgagagactgcaaagggacgtg 370
Query: 185 atagacatttctgctttggaaaactatcacagctgcacaaggggttagccagaacgttgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 atagacatttctgctttggaaaactatcacagctgcacaaggggttagccagaacgttgc 430
Query: 245 catctaacctagcaattctactgactagactagacaaaggaaacccatgagaaaagcatg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 catctaacctagcaattctactgactagactagacaaaggaaacccatgagaaaagcatg 490
Query: 305 cagggatgctcaaggcagcatgtttacaacagtcccaaaagagatgccaaagtccatcca 364
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 491 cagggatgctcaaggcagcatgtttacaacagtcccaaaagagatgccaaagaccatcca 550
Query: 365 acaacaaagagatggatacaataggcctatccaagcaatcaagtatgatatggcaacaga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 acaacaaagagatggatacaataggcctatccaagcaatcaagtatgatatggcaacaga 610
Query: 425 agcaaggcaaacacaacatgacacaaagtgggcaagccttaaaagcaacattctcctaca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 agcaaggcaaacacaacatgacacaaagtgggcaagccttaaaagcaacattctcctaca 670
Query: 485 caaaggaaagcaatcacaaaagaacatgttt 515
|||||||||||||||||||||||||||||||
Sbjct: 671 caaaggaaagcaatcacaaaagaacatgttt 701
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_n23.g1 MSMg01no493_n23.g1 CHROMAT_FILE:
MSMg01no493_n23.g1 PHD_FILE: MSMg01no493_n23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:34 2005
(556 letters)
>mm_chr12_92624306_92625251
Length = 946
Score = 872 bits (451), Expect = 0.0
Identities = 491/515 (95%), Gaps = 20/515 (3%)
Strand = Plus / Minus
Query: 1 agagtctttgggagccacaacacaattttccgattaaaaatatatcttgttaagaagcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 agagtctttgggagccacaacacaattttccgattaaaaatatatcttgttaagaagcaa 436
Query: 61 aggagacccattctatgatctgactttactacttttaatccccataccatgtcacatctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 435 aggagacccattctatgatctgactttactacttttaatccccataccatgccacatctg 376
Query: 121 ttaataaaggcagttgatgttaggtattaatttaatcatgcatatacaaatttctaatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttaataaaggcagttgatgttaggtattaatttaatcatgcatatacaaatttctaatca 316
Query: 181 caattaactcaaatcttgtttcttattctgtggtcccacctgtgtcttcagaggtttttt 240
||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 315 caattaactcaaatcttgt------ttctgtggtcccacctgtgtcttcagaggtttttt 262
Query: 241 ttttttttttccctttgtttgtccaatatcactttaaaacgaagtcattagaactgaata 300
|||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| |
Sbjct: 261 tttttttt----ctttgtttgtccaatatcactttaaaacggagtcaatagaactga--a 208
Query: 301 cacacctataaatacagctggacaacaatattattaacaattaatttttactaatgtaat 360
||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 cacac--------acagctggacaacaatattattaacaattaatttttactaatgtaat 156
Query: 361 gcactcacgtataaccaaagttattctagcatttgggtagtacatttttggcagttgatc 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 155 gcactcacgtataaccaaagttattctagcatttgggtaatacatttttggcagttgatc 96
Query: 421 agatatactttcctaaggaagggtttctcttgtgtttctacatagatcctgtggcagtgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 agatatactttcctaaggaagggtttctcttgtgtttctacatagatcctgtggcagtgg 36
Query: 481 tctcccctccaccactgtcatgaattgcttccatt 515
|||||||||||||||||||||||||||||||||||
Sbjct: 35 tctcccctccaccactgtcatgaattgcttccatt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 946
Length adjustment: 10
Effective length of query: 546
Effective length of database: 936
Effective search space: 511056
Effective search space used: 511056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
