Query= MSMg01no494_c24.b1 MSMg01no494_c24.b1 CHROMAT_FILE:
MSMg01no494_c24.b1 PHD_FILE: MSMg01no494_c24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:58 2005
(670 letters)
>mm_chr12_69579850_69580922
Length = 1073
Score = 1216 bits (629), Expect = 0.0
Identities = 660/671 (98%), Gaps = 7/671 (1%)
Strand = Plus / Plus
Query: 5 gaattcacaacatatgtgttcc-cagaagattccatgacagagctctacagagagatatg 63
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacaacatatg-gttccacagaagattccatgacagagctctacagagagatatg 263
Query: 64 gccaggattactgcaatcacagcttcagcacagtgagagactctcagcactgctaagcct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gccaggattactgcaatcacagcttcagcacagtgagagactctcagcactgctaagcct 323
Query: 124 gcaaccttagaagagaacgtagatactgttgtccagggagaactgaagttgtgaagtagt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcaaccttagaagagaacgtagatactgttgtccagggagaactgaagttgtgaagtagt 383
Query: 184 --ttgctttctacttgcttatactcctaagttcacaagcagcaactcaagttttgggctt 241
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tattgctttctatttgcttatactcctaagttcacaagcagcaactcaagttttgggctt 443
Query: 242 gttctatattcttgctcagtctctaccttatttttagtctacgaagagaacatcttctcc 301
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gttctatcttcttgctcagtctctaccttatttttagtctacgaagagaacatcttctcc 503
Query: 302 aactgttactggattttctattcatatttctttgctttgttgaccaggattcttgtccaa 361
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aactgtcactggattttctattcatatttctttgctttgttgaccaggattcttgtccaa 563
Query: 362 acttgaaatgcttatttcctcaacaccagtcattatacctcattcccccccc-ccc-ata 419
|||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||
Sbjct: 564 acttgaaatgcttatttcctcaacaccagtcattatacctca-tccccccccacccaata 622
Query: 420 tctataatactcactaagggaagacttcactacaaaacaaaaatgaaaaccatgatttca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tctataatactcactaagggaagacttcactacaaaacaaaaatgaaaaccatgatttca 682
Query: 480 atttttgtgagaaagatactcaaagttactatgacacgtttacagatctattctaaatag 539
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 683 atttttgtgagaaagatactcaaagttactgtgacacgtttacagatctattctaaatag 742
Query: 540 aaacaatttcagattaatgctagaaatgttaaaaatatttagaacatgagcagaatggaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 aaacaatttcagattaatgctagaaatgttaaaaatatttagaacatgagcagaatggaa 802
Query: 600 tgctcaaatgatctgtcctggtctctcattttacacaagagaactctaaagaagaaagtg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tgctcaaatgatctgtcctggtctctcattttacacaagagaactctaaagaagaaagtg 862
Query: 660 acttacccaag 670
|||||||||||
Sbjct: 863 acttacccaag 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1073
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1063
Effective search space: 701580
Effective search space used: 701580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_c24.g1 MSMg01no494_c24.g1 CHROMAT_FILE:
MSMg01no494_c24.g1 PHD_FILE: MSMg01no494_c24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:58 2005
(540 letters)
>mm_chr12_69763048_69763986
Length = 939
Score = 1021 bits (528), Expect = 0.0
Identities = 537/540 (99%), Gaps = 1/540 (0%)
Strand = Plus / Minus
Query: 1 cagagaagcgttgagagaatagatgtccttcttctgtcagcttctgtttgataaagagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 cagagaagcgttgagagaatagatgtccttcttctgtcagcttctgtttgataaagagat 680
Query: 61 tgatgaggaggtttgcacaccactgagtaaaagttaagttataatgaactcccatggcca 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 679 tgatgaggaggtttgcacaccactgagtaaaagttaagttataatgagctcccatggcca 620
Query: 121 gtgagaaaagaggagagtcattcattcaccttctaaagatgatggtgtcttccaagcagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gtgagaaaagaggagagtcattcattcaccttctaaagatgatggtgtcttccaagcagg 560
Query: 181 tgctaatatgaccccggcctcatggcttctcttcaggtaatctgagggaagtgaggctat 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgctaaaatgaccccggcctcatggcttctcttcaggtaatctgagggaagtgaggctat 500
Query: 241 gtgttggggatatttgatagatactatctgatatgtagaagtcttgtgaaagttggcagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gtgttggggatatttgatagatactatctgatatgtagaagtcttgtgaaagttggcagg 440
Query: 301 ttcaaaatggagtcatctatgtcaaactgtggcaagatggagctggggaaggacacaaag 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 439 ttcaaaatggagtcatctatgtcaaactgtgg-aagatggagctggggaaggacacaaag 381
Query: 361 ggaggctctcaggaataattttctgatcacaggaattatcttaagaaagtttcctaggct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggaggctctcaggaataattttctgatcacaggaattatcttaagaaagtttcctaggct 321
Query: 421 gcaattcatttactatctgactcacccagacagatatctgctcacataggacgttgactg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gcaattcatttactatctgactcacccagacagatatctgctcacataggacgttgactg 261
Query: 481 gtaccgatctgcccactcgaattccacaaagcagccatgttggacaggtttcatctggta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtaccgatctgcccactcgaattccacaaagcagccatgttggacaggtttcatctggta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 939
Length adjustment: 10
Effective length of query: 530
Effective length of database: 929
Effective search space: 492370
Effective search space used: 492370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
