XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTA
ATGTTACCCTGCAGTGACTAATTTTGACCTGACACCCACACTGTAAACTC
CAAGAAAACACATATTTTGCCTGCCCTCTTCTGACTATATTTCCAAGTCT
CAGACTGTGCCCGGTGTCAAGTATGTATTTGACGAATAAATCCTGCGATG
ATTTAAAATAAAAGCCAAACTACCAGGCTTTGTAATTTCCAGAGATTTGG
AGACCAAACAGAAGGCTGAGGCTGTACTGAAGGTATTTACAAACTGAAGG
GCAATACCTCTTCATTCACTCTTCAGTCAGGCAAGTCATAAGACATTTTC
TTCAAACATAACTTGCTTTCCTGGATCTAGTCTGAGGAAGGGACGAAATG
AAGTCATAAAAGAAATTGAAAGGGAGGAACTGAGCTGAGTGGGAATTAGA
TGTGATCAAGATATATTGTATAAAACTGTCAAAGACTAAATAAAACAATA
TTCTTTAAAAGAAGAAATATAATCTCTCTCTCTCTCTCTCTCTCTCTCAC
ACACACACACACACACACATTTTAACTCCAAGACTCACTCAAGCGCTGCC
TATCCTACCCAATTCAGCCTGTATATGAGCTAAGAGGTGACTGGACACAC
TGTTTCAACTTGTCCCGCTCCAATACTATTTACAAAGAGCCACAATATCT
ATACATTAACATGTGGGGCAGTGGCC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXACTGTAGCTGTCTTTAGACACACCAGAAGAGGG
CATCATCCCATTATAGATGGTTGTGAGCCACCATGTAGTTGCTGGGAATT
GAACTCAGGACCTCTGGAAGAGCAGACAGTGCTCTTAACCACTGAGCCAT
CTCTCCAGCTCCTACATCAGTCACTCTTGCTATGAGAATGACACCATTGT
TGTAATATTAGCTCCATGAAGTCCAGGAGAACTGACCCTCAAAAGTCAGC
ATTCCTAAACTTGTGGAGGTCTCGGGCTTAGTGCAAAGGTGAAAATTCCC
AGGCGCGAAGGTGATTTCACCTGTCAGGCCCCCTGGAACTATGGTTATGA
ATAATTGTGAGCCAACATGTAAGTGTCGGGAATTGAACCAGGGTCCTCTG
TAAGAGCAACAAAGTGCTCTGAACCACTAAGCCATCTCTCCAGTCCCTAG
ACCTCACATTTGTCGGTCCTAATCTTCACCCTCTCTCCTAGGCAGCATTG
TTTTTATAGGGTGAAGTCAGGATTCTTGTAGTGAACAATAACTTATACTG
TAGAATATGAAGGATTTCACTAAGATACCAAAGCAGATTAACTCCTAAGA
AAATACTGTTTGAGGAGCTGGAGGGATGGTTGGTAAAGAGTGTGCACGGG
CTGGGCAGTGGTGGCTCATGCCTTTAATCCCAGCACTTG

Query= MSMg01no494_p03.b1 MSMg01no494_p03.b1 CHROMAT_FILE:
MSMg01no494_p03.b1 PHD_FILE: MSMg01no494_p03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:54 2005
         (498 letters)



>mm_chr12_99810732_99811629
          Length = 898

 Score =  884 bits (457), Expect = 0.0
 Identities = 469/473 (99%)
 Strand = Plus / Plus

                                                                       
Query: 2   cagtgactaattttgacctgacacccacactgtaaactccaagaaaacacatattttgcc 61
           ||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||
Sbjct: 202 cagtgactaattttgacctgacacccacactgtaaactccaagaagacaggtattttgcc 261

                                                                       
Query: 62  tgccctcttctgactatatttccaagtctcagactgtgcccggtgtcaagtatgtatttg 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgccctcttctgactatatttccaagtctcagactgtgcccggtgtcaagtatgtatttg 321

                                                                       
Query: 122 acgaataaatcctgcgatgatttaaaataaaagccaaactaccaggctttgtaatttcca 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 acgaataaatcctgcgatgatttaaaataaaagccaaactaccaggctttgtaatttcca 381

                                                                       
Query: 182 gagatttggagaccaaacagaaggctgaggctgtactgaaggtatttacaaactgaaggg 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gagatttggagaccaaacagaaggctgaggctgtactgaaggtatttacaaactgaaggg 441

                                                                       
Query: 242 caatacctcttcattcactcttcagtcaggcaagtcataagacattttcttcaaacataa 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 caatacctcttcattcactcttcagtcaggcaagtcataagacattttcttcaaacataa 501

                                                                       
Query: 302 cttgctttcctggatctagtctgaggaagggacgaaatgaagtcataaaagaaattgaaa 361
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 502 cttgctttcctggatctagtctgaggaagggaagaaatgaagtcataaaagaaattgaaa 561

                                                                       
Query: 362 gggaggaactgagctgagtgggaattagatgtgatcaagatatattgtataaaactgtca 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gggaggaactgagctgagtgggaattagatgtgatcaagatatattgtataaaactgtca 621

                                                                
Query: 422 aagactaaataaaacaatattctttaaaagaagaaatataatctctctctctc 474
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 aagactaaataaaacaatattctttaaaagaagaaatataatctctctctctc 674


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space:   433344
Effective search space used:   433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no494_p03.g1 MSMg01no494_p03.g1 CHROMAT_FILE:
MSMg01no494_p03.g1 PHD_FILE: MSMg01no494_p03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:54 2005
         (662 letters)



>mm_chr12_99978099_99979160
          Length = 1062

 Score = 1230 bits (636), Expect = 0.0
 Identities = 645/648 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   actgtagctgtctttagacacaccagaagagggcatcatcccattatagatggttgtgag 60
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 650 actgtagctgtctttagacacaccagaagagggcatcatccaattatagatggttgtgag 591

                                                                       
Query: 61  ccaccatgtagttgctgggaattgaactcaggacctctggaagagcagacagtgctctta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ccaccatgtagttgctgggaattgaactcaggacctctggaagagcagacagtgctctta 531

                                                                       
Query: 121 accactgagccatctctccagctcctacatcagtcactcttgctatgagaatgacaccat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 accactgagccatctctccagctcctacatcagtcactcttgctatgagaatgacaccat 471

                                                                       
Query: 181 tgttgtaatattagctccatgaagtccaggagaactgaccctcaaaagtcagcattccta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tgttgtaatattagctccatgaagtccaggagaactgaccctcaaaagtcagcattccta 411

                                                                       
Query: 241 aacttgtggaggtctcgggcttagtgcaaaggtgaaaattcccaggcgcgaaggtgattt 300
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 410 aacttgtggaggtctcgggcttagtgcaaaggtgaaaattcccaggtgcgaaggtgattt 351

                                                                       
Query: 301 cacctgtcaggccccctggaactatggttatgaataattgtgagccaacatgtaagtgtc 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 350 cacctgtcaggccccctggaactatggttatgaataattgtgagccaacatgtaagtgcc 291

                                                                       
Query: 361 gggaattgaaccagggtcctctgtaagagcaacaaagtgctctgaaccactaagccatct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gggaattgaaccagggtcctctgtaagagcaacaaagtgctctgaaccactaagccatct 231

                                                                       
Query: 421 ctccagtccctagacctcacatttgtcggtcctaatcttcaccctctctcctaggcagca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ctccagtccctagacctcacatttgtcggtcctaatcttcaccctctctcctaggcagca 171

                                                                       
Query: 481 ttgtttttatagggtgaagtcaggattcttgtagtgaacaataacttatactgtagaata 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ttgtttttatagggtgaagtcaggattcttgtagtgaacaataacttatactgtagaata 111

                                                                       
Query: 541 tgaaggatttcactaagataccaaagcagattaactcctaagaaaatactgtttgaggag 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 tgaaggatttcactaagataccaaagcagattaactcctaagaaaatactgtttgaggag 51

                                                           
Query: 601 ctggagggatggttggtaaagagtgtgcacgggctgggcagtggtggc 648
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50  ctggagggatggttggtaaagagtgtgcacgggctgggcagtggtggc 3


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space:   685904
Effective search space used:   685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)