Query= MSMg01no495_n20.b1 MSMg01no495_n20.b1 CHROMAT_FILE:
MSMg01no495_n20.b1 PHD_FILE: MSMg01no495_n20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:01 2005
(601 letters)
>mm_chr12_83393598_83394598
Length = 1001
Score = 1027 bits (531), Expect = 0.0
Identities = 582/603 (96%), Gaps = 12/603 (1%)
Strand = Plus / Minus
Query: 1 cacaaagaaaccctgtctcaaaaaaaccaaaaaccaaaaaaaacaaac-aaacaaacaaa 59
|||| |||||||||||||| ||||||||||||||||| |||| |||||| ||||
Sbjct: 710 cacagagaaaccctgtctc-aaaaaaccaaaaaccaa-------aaactaaacaagcaaa 659
Query: 60 aaa-aaaaaaaaaccagaacagaacccaccaatcaccctagcatcaactgctgaccgtga 118
||| | || |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 aaagacaagaaaa-cagaacagaacccaccaatcaccctagcatcaactgctgaccgtga 600
Query: 119 aaaaagactgcgaagctcctgagaatgaaattctgccaccaacagagaggagggacctga 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 aaaaagactgcgaagctcctgagaatgaaattctgccaccaacagagaggagggacctga 540
Query: 179 ggcccggagctctggaccagggctgaggctcacatcaaggaaagccttcctcctggtaga 238
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 539 ggcctggagctctggaccagggctgaggttcacatcaaggaaagccttcctcctggtaga 480
Query: 239 gtctgcacaggattagggtgaaggtgtgtgagactgcatctctccctactctataaatca 298
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gtctgcacaggagtggggtgaaggtgtgtgagactgcatctctccctactctataaatca 420
Query: 299 gccttaccctgccctaatcaaacagcgcagttagatcagtttccacagttgtaatacctt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gccttaccctgccctaatcaaacagcgcagttagatcagtttccacagttgtaatacctt 360
Query: 359 acagtgaagatgggttccactgggatttcagtggcgacgagtcacattcagaccatgcag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 acagtgaagatgggttccactgggatttcagtggcgacgagtcacattcagaccatgcag 300
Query: 419 ctactaaacaaggtaagcaggacacatcaaactcaaagaaaagtataaaggagtaatcaa 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ctactaaacaaggtaagcaggacacatcaaactcaaagaaaagtataaaggagtaatcaa 240
Query: 479 tactggctcaagaagaaaaataggtctataaaaagaaactgaatttgtaattaaaaatct 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tactggctcaagaagaaaaataggtctataaaaagaaactgaatttgtaattaaaaatct 180
Query: 539 ttccacacagaaaaaaagaaaaaaaaaaatcccaggcctagataaaaaaagaaacaatcc 598
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ttccacacagaaaaaaa-agaaaaaaaaatcccaggcctagataaaaaaagaaacaatcc 121
Query: 599 aat 601
|||
Sbjct: 120 aat 118
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space: 585681
Effective search space used: 585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_n20.g1 MSMg01no495_n20.g1 CHROMAT_FILE:
MSMg01no495_n20.g1 PHD_FILE: MSMg01no495_n20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:01 2005
(633 letters)
>mm_chr12_83255954_83256988
Length = 1035
Score = 1064 bits (550), Expect = 0.0
Identities = 614/636 (96%), Gaps = 3/636 (0%)
Strand = Plus / Plus
Query: 1 tgggaatgacctggaggtcagcgatgtgaatgacacatccctgggggaaacaccctccag 60
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 tgggaatgacctggaggtcagcgatctgaatgacacatccctgggggaaacaccctccaa 260
Query: 61 agtaactctaaccaacttccccacagtcaaagcctttacggtgcttctgcctcgagaatc 120
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 261 agtaactctaaccaacttccccacagtcaaaacctttatggtgcttctgcctcgagaatc 320
Query: 121 aagttgtctgttaaaatgtggccatatcttctcagactctcactagaaatcttagcccgt 180
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 aagttgtctgttaaaatgcgggcatatcttctcagactctcactagaaatcttagcctgt 380
Query: 181 aaactgttgtggcctatctgtttatgatgctaagtggcttcatggctcatggctgggctt 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaactgttgtgtcctatctgtttatgatgctaagtggcttcatggctcatggctgggctt 440
Query: 241 catggtaaggcagtggtcttagatggaaggcttctgagctagaagcaacactttctttca 300
||||| |||||||||||||| | |||||||||||||||||||||| ||||||||||||||
Sbjct: 441 catggcaaggcagtggtctttgctggaaggcttctgagctagaagtaacactttctttca 500
Query: 301 cttga--gtgccccacctttccactacaatcctgacgctctgttgcagaggtaagctctc 358
||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 cttgagtgtgtcccacctttccactacaatcctgacgctctgttgcagaggcaagctctc 560
Query: 359 tcgcctgtgtgattggcaggttttctaagcgtggtaatagcacactggctcacctggggt 418
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcgcctgtgtgattgacaggttttctaagcgtggtaatagcacactggctcacctggggt 620
Query: 419 cccttgggatttagttcactatcactaaacccccagctatgacttcgtagctctccctca 478
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 621 cccttgggatttagctcactatcacgaaacccccagctatgacttcgtagctctccctca 680
Query: 479 aggtcacccctgacatttacttttccctgtgacatcacagctccgtctcataattcattt 538
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 681 aggtcacccctgacatttacttctccctgtgacatcacagctccgtctcataattcattt 740
Query: 539 tcatgctgtcagagagacagatatgaattatgagtgactacagagatcatcagacagtag 598
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 741 tcatgctgtcagagagacagatatgaattatgagtgactacagagatcatcagacagtgg 800
Query: 599 attctaatctttttt-aaaatttaaattattttcca 633
||||||||||||||| ||||||||||||||||||||
Sbjct: 801 attctaatctttttttaaaatttaaattattttcca 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1035
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1025
Effective search space: 638575
Effective search space used: 638575
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
