Query= MSMg01no496_d03.b1 MSMg01no496_d03.b1 CHROMAT_FILE:
MSMg01no496_d03.b1 PHD_FILE: MSMg01no496_d03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:27 2005
(578 letters)
>mm_chr12_36285666_36286648
Length = 983
Score = 1096 bits (567), Expect = 0.0
Identities = 577/583 (98%), Gaps = 5/583 (0%)
Strand = Plus / Plus
Query: 1 tggccatttcagaactgtgatataataaatgatttatttaactgataaatgataaaactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggccatttcagaactgtgatataataaatgatttatttaactgataaatgataaaactg 260
Query: 61 aagtgcctgttgattccccgactcacatcctgctagcttctcatgaggtaagacactaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtgcctgttgattccccgactcacatcctgctagcttctcatgaggtaagacactaag 320
Query: 121 agacacattgccagtggctgagaagattctgtttctttttgtttccacatgtccatagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agacacattgccagtggctgagaagattctgtttctttttgtttccacatgtccatagaa 380
Query: 181 cacatgttctaatgatttccaaaggaagaaaatatgagttttctgggtgca-----gtgg 235
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 cacatgttctaatgatttccaaaggaagaaaatatgagttttctgggtgcatattagtgg 440
Query: 236 agtgagcaaattctatatatcatgttatgaaaccaagaaattcacagtaacataattaat 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtgagcaaattctatatatcatgttatgaaaccaagaaattcacagtaacataattaat 500
Query: 296 tctggaagagtcattcttttatacaaaacataagaatgatgccagttgaatctcattttc 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctggaagagtcattcttttatacaaaacataagaatgatgccagttgaatctcattttc 560
Query: 356 ttttaaaacatatttatttatagggctagagaagtggatccatagcaatgtacctgccat 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttaaaacatatttatttatagggctagagaagtggatccatagcaatgtacctgccat 620
Query: 416 gcaaccaagaactgtgaggtgtagtggcactgtctataatcctagtgctgggagcagtgg 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 621 gcaaccaagaactgtgaggtgtagtggcactgtctataatcctagtgctgggagcggtgg 680
Query: 476 ggtgaggagggtcagagacaggctcagccagaactcagtgaccagccaggttagcccatg 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggtgaggagggtcagagacaggctcagccagaactcagtgaccagccaggttagcccatg 740
Query: 536 tgctctggattcaatcagaggcactggatattgtctaaaaaaa 578
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgctctggattcaatcagaggcactggatattgtctaaaaaaa 783
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 983
Length adjustment: 10
Effective length of query: 568
Effective length of database: 973
Effective search space: 552664
Effective search space used: 552664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no496_d03.g1 MSMg01no496_d03.g1 CHROMAT_FILE:
MSMg01no496_d03.g1 PHD_FILE: MSMg01no496_d03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:27 2005
(189 letters)
>mm_chr12_36455372_36455960
Length = 589
Score = 366 bits (189), Expect = e-106
Identities = 189/189 (100%)
Strand = Plus / Minus
Query: 1 caaacattaaagtgaactgaaaaggtttagagatctaaatatctttcttgatttggaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 caaacattaaagtgaactgaaaaggtttagagatctaaatatctttcttgatttggaaga 330
Query: 61 aatctgaggaatttcaaggttttcaaccttaaaggcataaacaactgagctggcaacgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aatctgaggaatttcaaggttttcaaccttaaaggcataaacaactgagctggcaacgcc 270
Query: 121 tgacttatttccctgcattcttgtggagctcagagggtgtggcctaggctagggtgccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tgacttatttccctgcattcttgtggagctcagagggtgtggcctaggctagggtgccag 210
Query: 181 tcagcagta 189
|||||||||
Sbjct: 209 tcagcagta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
