Query= MSMg01no496_k06.b1 MSMg01no496_k06.b1 CHROMAT_FILE:
MSMg01no496_k06.b1 PHD_FILE: MSMg01no496_k06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:02 2005
(353 letters)
>mm_chr12_26177542_26178294
Length = 753
Score = 675 bits (349), Expect = 0.0
Identities = 352/353 (99%)
Strand = Plus / Plus
Query: 1 gagaaaatcgctctattcttaaaacgcaactgtcagtgtattaagaggaaggaaaactga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagaaaatcgctctattcttaaaacgcaactgtcagtgtattaagaggaaggaaaactga 260
Query: 61 ctactaggaacagaactgagctgccacactgcgggagcttctagaagggctgtcttgggg 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 ctactaggaacagaactgagctgccacactgtgggagcttctagaagggctgtcttgggg 320
Query: 121 cacagcagacagtgggactagtgttgcaccacagtgggctcctcccttgggctccagatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacagcagacagtgggactagtgttgcaccacagtgggctcctcccttgggctccagatg 380
Query: 181 aggaagaacaaaactggttgcttacttaaatattgtatatgattgttcctttagaaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggaagaacaaaactggttgcttacttaaatattgtatatgattgttcctttagaaaaag 440
Query: 241 tggggtccttagtaaggattattcaggacaggggttactcaataaaaaacagagcatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggggtccttagtaaggattattcaggacaggggttactcaataaaaaacagagcatgaa 500
Query: 301 gaataagtaatggttggtgagctgggtggctagtgcttagtgggttgggtgaa 353
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaataagtaatggttggtgagctgggtggctagtgcttagtgggttgggtgaa 553
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no496_k06.g1 MSMg01no496_k06.g1 CHROMAT_FILE:
MSMg01no496_k06.g1 PHD_FILE: MSMg01no496_k06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:02 2005
(299 letters)
>mm_chr12_26338549_26339247
Length = 699
Score = 551 bits (285), Expect = e-161
Identities = 299/311 (96%), Gaps = 12/311 (3%)
Strand = Plus / Minus
Query: 1 ccagactgaaaagttcaaagaaaatcttaacagatcaatggcatttatctcttatttggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ccagactgaaaagttcaaagaaaatcttaacagatcaatggcatttatctcttatttggc 339
Query: 61 tgcaagtccagaacatccactcccctgcccacttcccttaccataaagaactggggtctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tgcaagtccagaacatccactcccctgcccacttcccttaccataaagaactggggtctt 279
Query: 121 aaaccaggagacacaatagatcctttctttctaatgctagctaagtatttgatccagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 aaaccaggagacacaatagatcctttctttctaatgctagctaagtatttgatccagaga 219
Query: 181 tggcatcatcatcataat------------taataataataataataataataataataa 228
|||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 218 tggcatcatcatcataattaataataataataataataataataataataataataataa 159
Query: 229 taataatacagggatcttcctttactttgtcctctttcctctgggctctggtcatcccct 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 taataatacagggatcttcctttactttgtcctctttcctctgggctctggtcatcccct 99
Query: 289 ggaacactttg 299
|||||||||||
Sbjct: 98 ggaacactttg 88
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
