Query= MSMg01no497_g20.b1 MSMg01no497_g20.b1 CHROMAT_FILE:
MSMg01no497_g20.b1 PHD_FILE: MSMg01no497_g20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:06 2005
(568 letters)
>mm_chr12_43890537_43891504
Length = 968
Score = 1081 bits (559), Expect = 0.0
Identities = 562/563 (99%)
Strand = Plus / Plus
Query: 5 gaattctttgtttagctcttagccccattttttaatggggttattcgattttctggagtc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgtttagctcttagccccattttttaatggggttattcgattttctggagtc 264
Query: 65 taccttcttgagttctttatatatattggatattagtcccctatctgatttaggataggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taccttcttgagttctttatatatattggatattagtcccctatctgatttaggataggt 324
Query: 125 aaagattctttcccaatctgttggtggcctttttgtcttattgagggtatcttttgcctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaagattctttcccaatctgttggtggcctttttgtcttattgagggtatcttttgcctt 384
Query: 185 tttttaagctagtgtaagcacctctcatgtcatagattgatggagtatccattttcctct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttttaagctagtgtaagcacctctcatgtcatagattgatggagtatccattttcctct 444
Query: 245 ttacagtgtatctacttatagtctccctcatagaaataatgtgttctattttaaaagctt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttacagtgtatctacttatagtctccctcatagaaataatgtgttctattttaaaagctt 504
Query: 305 ccttcttcactgctcagggtatagtatagagtgctcccgctaaatatgtactattaaagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccttcttcactgctcagggtatagtatagagtgctcccgctaaatatgtactattaaagc 564
Query: 365 aagattcttaagtgtggtgcttctagatgtgtccagcattaccgtataattcatcaggga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagattcttaagtgtggtgcttctagatgtgtccagcattaccgtataattcatcaggga 624
Query: 425 aagtctaccctgtactggaaatgttttgtttttgtaacaattctttgaaggacttcttct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aagtctaccctgtactggaaatgttttgtttttgtaacaattctttgaaggacttcttct 684
Query: 485 tgatagtttttatgatcaaactgattttcagaaaaaggagccaacatacatatgtatatg 544
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgatagtttttacgatcaaactgattttcagaaaaaggagccaacatacatatgtatatg 744
Query: 545 tgtgtatatggtgtgtgtgtgtg 567
|||||||||||||||||||||||
Sbjct: 745 tgtgtatatggtgtgtgtgtgtg 767
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space: 534564
Effective search space used: 534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_g20.g1 MSMg01no497_g20.g1 CHROMAT_FILE:
MSMg01no497_g20.g1 PHD_FILE: MSMg01no497_g20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:06 2005
(589 letters)
>mm_chr12_44060280_44061268
Length = 989
Score = 781 bits (404), Expect = 0.0
Identities = 475/526 (90%), Gaps = 44/526 (8%)
Strand = Plus / Minus
Query: 65 tatttaagtacaaactaattttatgc-aacaaatccaatcaaactttatattaacaatta 123
|||||||| |||||| |||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 989 tatttaagaacaaacaaattttat-cttacaaatccaatcaaactttatattaacaatta 931
Query: 124 atactacttatttttgactcacaaagattctcctgagtttcctgcattgatactcacatt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 atactacttatttttgactcacaaagattctcctgagtttcctgcattgatactcacatt 871
Query: 184 tctttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttatctgtctgtctgtctgtc 243
||||||||||||||||||||||||||
Sbjct: 870 tctttgtgtgtgtgtgtgtgtgtgtg---------------------------------- 845
Query: 244 tgtctgtctgtgtgtgtttatctgtctgtctgtctgtgtgactgtgtgtttgtatgtgtg 303
||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 844 --------tgtgtgtgtttatctgtctgtctgtctgtgtgactgtgtgtttatatgtgtg 793
Query: 304 taatgaatataatttttcatacaatgtattctgatatattgatcttataatttatttaat 363
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 tattgaatataatttttcatacaatgtattctgatatattgatcttataatttatttaat 733
Query: 364 gtaaaataaagagcattttatttccccagtgacataattaggacatttaaaaatacatga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gtaaaataaagagcattttatttccccagtgacataattaggacatttaaaaatacatga 673
Query: 424 atatgttattcttggtccagaaagcaaacaaataaacaaagtttgacaatttgccaagaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 atatgttattcttggtccagaaagcaaacaaataaacaaagtttgacaatttgccaagaa 613
Query: 484 aaatacaaagagttatccagtgttttcaaaaaggtgcttttgaaaaactactccattatt 543
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 612 aaatacaaagagttatccagtgttttcaaaaaggtgtttttgaaaaactactccattatt 553
Query: 544 tcttttgaagtgcttagatattaagatcactaaagtagatctaaga 589
||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 552 tcttttgaagtgcttagctattaagatcactaaagtagatctaaga 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space: 566841
Effective search space used: 566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
