Query= MSMg01no498_b23.b1 MSMg01no498_b23.b1 CHROMAT_FILE:
MSMg01no498_b23.b1 PHD_FILE: MSMg01no498_b23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:02 2005
(525 letters)
>mm_chr12_95370426_95371350
Length = 925
Score = 969 bits (501), Expect = 0.0
Identities = 516/521 (99%)
Strand = Plus / Plus
Query: 5 gaattcagtacccttttggaacccacaaagaaaagacaggaaacttggatacattctatg 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtacccatttggaacccacaaagaaaagacaggaaacttggatacattctatg 264
Query: 65 taaactcaaacgtgaattaaactctctgaaacttatctttttaaatgtaacagccacaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taaactcaaacgtgaattaaactctctgaaacttatctttttaaatgtaacagccacaag 324
Query: 125 tctggattgttttaaaaattaaattaaaaattatcagtgacttagaagatgtatatgtgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctggattgttttaaaaattaaattaaaaattatcagtgacttagaagatgtatatgtgg 384
Query: 185 caaattacaaattgagacaaaagatgtgtgtgatttggctagagcatttgttaatgatgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caaattacaaattgagacaaaagatgtgtgtgatttggctagagcatttgttaatgatgt 444
Query: 245 catgttgaacaacctatttcataagctcaatcattggtatgaaagatgggattggtacag 304
|||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 445 catgttgagcaacctatttcataaactcaatcattggtatgaaagatgggattggtacag 504
Query: 305 aaaataaggatgttgagacattttagttaataattgaatcaaagtagctagcacactatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaaataaggatgttgagacattttagttaataattgaatcaaagtagctagcacactatg 564
Query: 365 tgacacaaagaagaaggtcatcaaatatcactcaaggctgctataagtgctgcaaatcat 424
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 565 tgacacaaagaagaaggtcatcaaatatcactcaaggctgctacaagtgctgcaaatcat 624
Query: 425 atttcaacaactctcatagggaatatctaataaaaatagtattgaatttgaactatttat 484
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 625 atttcaacaactctcatagggaatatctaataaaaataatattgaatttgaactatttat 684
Query: 485 tcataacaaaacacaatcaagtagctgttcagtagcttata 525
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tcataacaaaacacaatcaagtagctgttcagtagcttata 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no498_b23.g1 MSMg01no498_b23.g1 CHROMAT_FILE:
MSMg01no498_b23.g1 PHD_FILE: MSMg01no498_b23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:02 2005
(382 letters)
>mm_chr12_95495543_95496324
Length = 782
Score = 611 bits (316), Expect = e-179
Identities = 371/396 (93%), Gaps = 14/396 (3%)
Strand = Plus / Minus
Query: 1 acattactgacctgaccagacttagaggataatggaaaacaagatctcaaaataaagaaa 60
|||||||||||||||| | ||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 712 acattactgacctgactacacttagaggataatgaaaaagaagatctcaaaataaagaaa 653
Query: 61 aaa--aaataaaacaaagaaaggaa-----gga---agggagg----gagggagggaggg 106
||| |||||||||||||||||||| ||| ||||||| |||||||||||||
Sbjct: 652 aaaataaataaaacaaagaaaggaagggagggagggagggagggagagagggagggaggg 593
Query: 107 ctggagggatgatgaaatgaagaaaaccaattatggggagaggaaaatagggttctatga 166
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 agggagggaggatgaaatgaagaaaaccaattatggggagaggaaaatagggttctatga 533
Query: 167 ttatatttcattgtatacatgtattaaattctcaagaatgagaaacattttttaattatc 226
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 532 ttatatttcattgtatacatgtattaaattctcaagaatgagaaacattttttaattacc 473
Query: 227 aaatgttctgtctaggatgccaggtagtgtgggagggagaggaagtggtagcaaggagat 286
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 472 aaatgttctgtctaggatgccagggagtgtgggagggagaggaagtggtagcaaggagat 413
Query: 287 aatgaatggatggaaggaatgcatagaatgtataaagctcaactgcttacctcaaggata 346
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 412 aatgaatggatggaaggagtgcaaagaatgtataaagctcaactgcttacctcaaggata 353
Query: 347 aggaaaagctgaacaggtgctgtttaggattctgag 382
||||||||||||||||||||||||||||||||||||
Sbjct: 352 aggaaaagctgaacaggtgctgtttaggattctgag 317
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
