XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTA
TATATTTTGGATATTAGTCGTCTATCAGATTTGAAGCTGGTGAAAATTAT
TTCCATGTAGGCTTCTATGTGGCCCAAGTGACGGTGTCCTTTGACATGTA
GAAGCTTTTCAGTTTTATGAGGTACCATTTATTAAATATTGATATTAGTA
CCTGTGCTAATGATGTTTGTCCAGAAAGTCTTTCCCTGTTCAATCTATTC
CCCACTTTCTCTTGTATCAGGTTCAGTATGTGCTTTTATGTTGAGGTCTT
CCATCTATTTGGAGTTGAATTTTGTGCAGCGTGAGAAGTATGAGTCTACT
TGGCTACCTCTACATGAAGCCATCCAGTTTGACAGGCACCATTTGTTGGA
GATGCTGCCCTTCTTACACTATGTGTTTCTGGCTTCATAAAATTCATGTG
TCTAGAGGTGTGTGGATTTATGTCTGGGTCTTCAATTTGATTACATTGAT
TTTATGTCTGTTTTTGTGCCAATACCATGCTGTTTTTGTTACTATAGCTC
TGTAGTACAATTTGAAGTGAAGGATGGTAACACCTTCAGCAGATCTTTTT
GTATTCAGGATTGTTTTAGCTATACTGCTTCTTTGTGTTTCTATGTGAAG
CTGAAAATTGTCCTTCCAAGGTCCATGAAAAACTGTGTTGGAATTT

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAGGAAACTTGTTTTCATGTGTTCTGGGTTACATC
ATCTCTGGGGAGCAAAGGACATTACCTTGATTTCTGGATCCATTCTTTCA
TCCATTCATTTGATCTACAGATATTTGCAGAGGCCATCCTAAGCATGTGT
TTCTAACTACAAGGGAGCTACTCACTGGGGGCTGTGAAGTCAGAGGCTAT
CAGATAAGCTGTCTGAAGAGGAGTGGATACACAGGCCAGAGTGGGGAGAG
GAGCTTTCGAGACAGACAGACATCTGAATGTAGGTGACAACTGAATTGAG
TACTGGGAAGAACTAGCATTACCACTTTGAATGATGGGAGTTTTCCTGGC
AGACAAATGTGAAATGTGAATTATAATTATAGGCACATGCAGGGATCACA
TTGTGACAAGCATGAGGGACAGTATTGCCAAGGAAGGGAGAAAACACTCT
GGAGTTTCAGGTAGGAGACTCACTGAAGCGGGTGAGTAACGAACCCATAC
TGAGGGTCTGGAGTTTCAGGTAGGAGACTCACTGAAGCGGGTGAGTAACG
GGCCCATACTGAGGGTTTGGAGTTTCAGGTAGGAGACTCACTGAAGAGGG
TGAGTAACGGACCCATACTGAGGGTTTCACAGATAAAGGACCTCAATTCT
AGGAACTATGAAGGTCAGTCAGCATCTTCCCAAGAAN

Query= MSMg01no499_f03.g1 MSMg01no499_f03.g1 CHROMAT_FILE:
MSMg01no499_f03.g1 PHD_FILE: MSMg01no499_f03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:40 2005
         (563 letters)



>mm_chr12_73341467_73342429
          Length = 963

 Score = 1000 bits (517), Expect = 0.0
 Identities = 551/563 (97%), Gaps = 2/563 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggaaacttgttttcatgtgttctgggttacatcatctctggggagcaaaggacattacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26  aggaaacttgttttcatgtgttctgggttacatcatctctggggagcaaaggacattacc 85

                                                                       
Query: 61  ttgatttctggatccattctttcatccattcatttgatctacagatatttgcagaggcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 86  ttgatttctggatccattctttcatccattcatttgatctacagatatttgcagaggtca 145

                                                                       
Query: 121 tcctaagcatgtgtttctaactacaagggagctactcactgggggctgtgaagtcagagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tcctaagcatgtgtttctaactacaagggagctactcactgggggctgtgaagtcagagg 205

                                                                       
Query: 181 ctatcagataagctgtctgaagaggagtggatacacaggccagagtggggagaggagctt 240
           || ||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||
Sbjct: 206 ctgtcagataagctgtctgaagaggagtggatacacaggccacagtggg--gaggagctt 263

                                                                       
Query: 241 tcgagacagacagacatctgaatgtaggtgacaactgaattgagtactgggaagaactag 300
           || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 264 tcaagacagacagacatctgaatgtaggtgacaactgagttgagtactgggaagaactag 323

                                                                       
Query: 301 cattaccactttgaatgatgggagttttcctggcagacaaatgtgaaatgtgaattataa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cattaccactttgaatgatgggagttttcctggcagacaaatgtgaaatgtgaattataa 383

                                                                       
Query: 361 ttataggcacatgcagggatcacattgtgacaagcatgagggacagtattgccaaggaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttataggcacatgcagggatcacattgtgacaagcatgagggacagtattgccaaggaag 443

                                                                       
Query: 421 ggagaaaacactctggagtttcaggtaggagactcactgaagcgggtgagtaacgaaccc 480
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 444 ggagaaaacactctggagtttcaggtaggagactcactgaagagggtgagtaacggaccc 503

                                                                       
Query: 481 atactgagggtctggagtttcaggtaggagactcactgaagcgggtgagtaacgggccca 540
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 504 atactgagggtttggagtttcaggtaggagactcactgaagcgggtgagtaacggaccca 563

                                  
Query: 541 tactgagggtttggagtttcagg 563
           || ||||||||||||||||||||
Sbjct: 564 tattgagggtttggagtttcagg 586


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space:   527009
Effective search space used:   527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)