Query= MSMg01no501_e07.b1 MSMg01no501_e07.b1 CHROMAT_FILE:
MSMg01no501_e07.b1 PHD_FILE: MSMg01no501_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:04 2005
(670 letters)
>mm_chr12_53504398_53505467
Length = 1070
Score = 1162 bits (601), Expect = 0.0
Identities = 632/643 (98%), Gaps = 2/643 (0%)
Strand = Plus / Minus
Query: 4 ggaattctgaaatgttcacgctaataacgttttagaagtccttgaaaaactccaactatc 63
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 643 ggaattctgaaatgctcacgctaataacgatttagaagtccttgaaaaactccaactatc 584
Query: 64 aagacagaaacaagaagagagtattagttagctagatgcccattaaagacatgtaatttt 123
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 583 aagacagaaacaagaagagagtatcagttagctagatgcccattaaagacatgtagtttt 524
Query: 124 taattaaaatttttctcac--aaaaaaaatgtcagaggcagagagcttccaacaaattct 181
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 523 taattaaaatttttctcacaaaaaaaaaatgtcagaggcagagagcttccaacaaattct 464
Query: 182 cttaaagacctgtgaagagatgttaccaccaccaagacatttaaagatgagggttttcga 241
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 463 cttaaagacctgtgaagagatgttaccaccaccaagacatttaaagatgaggggtttcga 404
Query: 242 ttcttgccatactccccactcaacttgcctattggcctgtctagaaatcagatgagcatt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttcttgccatactccccactcaacttgcctattggcctgtctagaaatcagatgagcatt 344
Query: 302 tagttataaacttaaccagatgcgatgctatccctgctgctgttccaggtgtattttcat 361
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 343 tggttataaacttaaccagatgagatgctatccctgctgctgttccaggtgtattttcat 284
Query: 362 tgcttgaacaaattaacacagccactggtactaagactgaacaggtatatggtgtcttgc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tgcttgaacaaattaacacagccactggtactaagactgaacaggtatatggtgtcttgc 224
Query: 422 tagtcatccctgcaaagaaggaccatcggaagcactttcctcgccgccagtaagtctagc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tagtcatccctgcaaagaaggaccatcggaagcactttcctcgccgccagtaagtctagc 164
Query: 482 attgtgccttcactgtctcaccttggggctataccaatcctctagccctagatcaaaatt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 attgtgccttcactgtctcaccttggggctataccaatcctctagccctagatcaaaatt 104
Query: 542 tagttcataagtagcttcaacccttccccttccagaaggcaccacacaggtctattacac 601
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 tagttcataagtaacttcaacccttccccttccagaaggcaccacacaggtctattacac 44
Query: 602 caatgctgactggactcagctacaagcaacacattgtctaaaa 644
||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 43 caatgctgactggactcagctacgagcaacacattgtctaaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no501_e07.g1 MSMg01no501_e07.g1 CHROMAT_FILE:
MSMg01no501_e07.g1 PHD_FILE: MSMg01no501_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:04 2005
(577 letters)
>mm_chr12_53372624_53373600
Length = 977
Score = 1054 bits (545), Expect = 0.0
Identities = 569/577 (98%)
Strand = Plus / Plus
Query: 1 atttctaaaagttctctgaaacagttgcatatgtgtacatgtgcgcacacacattgggct 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 atttctaaaagttctctgaaacagttgcaaatgtgtacatgtgcgcacacacattgggct 260
Query: 61 tctaggaagataatgaaagcaaaatatctctgtagataatttttattggttattttagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctaggaagataatgaaagcaaaatatctctgtagataatttttattggttattttagct 320
Query: 121 ttgccattgacatttaatttatgaaaaagtttaaatctaggattttttggcaagctctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgccattgacatttaatttatgaaaaagtttaaatctaggattttttggcaagctctaa 380
Query: 181 atgttctttgttactagtagaagagcatcatcaatatgagtgttaaatgccttaatgtat 240
||| ||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 atgatctttgttactggtaggagagcatcatcaatatgagtgttaaatgtcttaatgtat 440
Query: 241 ttgttatcgttatggagtattcaggtatgatgggctataaaagatgaaactggcataaaa 300
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgttattgtaatggagtattcaggtatgatgggctataaaagatgaaactggcataaaa 500
Query: 301 tgcaaataaaatagtttatcattttgatgctctctctactgtacaatgtgccttttcctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgcaaataaaatagtttatcattttgatgctctctctactgtacaatgtgccttttcctt 560
Query: 361 tttaaagtacaagagttatctgactcctcgaggtcccacatttacaatgtgtcatagctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttaaagtacaagagttatctgactcctcgaggtcccacatttacaatgtgtcatagctg 620
Query: 421 aacacagttctgattgagtttaaagctctgcatcaagggtctctggtaacatctgagtcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aacacagttctgattgagtttaaagctctgcatcaagggtctctggtaacatctgagtcg 680
Query: 481 tggtttgctgagttcagccttagggcatccaacccatttaaactgaagttaagttggtga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggtttgctgagttcagccttagggcatccaacccatttaaactgaagttaagttggtga 740
Query: 541 ttctgtgataaattatattcaccattgtatgtgtcaa 577
||||||||||||||| |||||||||||||||||||||
Sbjct: 741 ttctgtgataaattacattcaccattgtatgtgtcaa 777
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
