Query= MSMg01no501_p17.b1 MSMg01no501_p17.b1 CHROMAT_FILE:
MSMg01no501_p17.b1 PHD_FILE: MSMg01no501_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:54 2005
(678 letters)
>mm_chr12_26873088_26874165
Length = 1078
Score = 1303 bits (674), Expect = 0.0
Identities = 677/678 (99%)
Strand = Plus / Plus
Query: 1 caggaactcagtaacagcttacagcctttctctttctaaagcaatggcagctgactatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggaactcagtaacagcttacagcctttctctttctaaagcaatggcagctgactatat 260
Query: 61 ggaaagatgaaggatgcctcctcactggacgctgatgcgaactgaactcaaggcagataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaaagatgaaggatgcctcctcactggacgctgatgcgaactgaactcaaggcagataa 320
Query: 121 aacctataccttaacatgagctaactccaccagtcttcctgtggtgctgatctgtctgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacctataccttaacatgagctaactccaccagtcttcctgtggtgctgatctgtctgac 380
Query: 181 aaaagctacctctgggagggagaggttattctagatccttcttccaaggaaacagtacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaagctacctctgggagggagaggttattctagatccttcttccaaggaaacagtacat 440
Query: 241 cagtatacaatatattcaaagacatgagcccacaagagtcaaaaccataatgatggacca 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagtatacaagatattcaaagacatgagcccacaagagtcaaaaccataatgatggacca 500
Query: 301 aaccaggatctggaatgctgccactccatcctatttacatgtctatctagatcatttgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaccaggatctggaatgctgccactccatcctatttacatgtctatctagatcatttgct 560
Query: 361 tcctttgcagagagctcagaaagcaagatagaggtacagagatagaggcaaaagcacaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcctttgcagagagctcagaaagcaagatagaggtacagagatagaggcaaaagcacaga 620
Query: 421 cagacataaaaggagagaaagatagagacacatagatatagagaaagataaaaagagaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagacataaaaggagagaaagatagagacacatagatatagagaaagataaaaagagaga 680
Query: 481 gactataagtgaagctgcagctcttgtctctgcagaggtggagagtagatggtagtaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gactataagtgaagctgcagctcttgtctctgcagaggtggagagtagatggtagtaaaa 740
Query: 541 aaaaacgttgattgtcctggccaacaaggttgtctcagaaatcactctctaaacaaagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaaaacgttgattgtcctggccaacaaggttgtctcagaaatcactctctaaacaaagct 800
Query: 601 gcagagagaaaccaggctatctgaaacactatgagactgtctgtgaaaaacaaaatgctg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gcagagagaaaccaggctatctgaaacactatgagactgtctgtgaaaaacaaaatgctg 860
Query: 661 cttcccccagggcacctt 678
||||||||||||||||||
Sbjct: 861 cttcccccagggcacctt 878
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1078
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1068
Effective search space: 713424
Effective search space used: 713424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no501_p17.g1 MSMg01no501_p17.g1 CHROMAT_FILE:
MSMg01no501_p17.g1 PHD_FILE: MSMg01no501_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:54 2005
(629 letters)
>mm_chr12_26995901_26996929
Length = 1029
Score = 1185 bits (613), Expect = 0.0
Identities = 625/633 (98%), Gaps = 8/633 (1%)
Strand = Plus / Minus
Query: 1 cttcccttactcatatttgatgcttcaccatatagtgggccttggagatcatttattata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 cttcccttactcatatttgatgcttcaccatatagtgggccttggagatcatttattata 770
Query: 61 tccaaagttgaggaaacagacttgggggagtcatgcacttatcatcttgagcactaggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 tccaaagttgaggaaacagacttgggggagtcatgcacttatcatcttgagcactaggtg 710
Query: 121 gcagtcaaactccatgttcagcttttcagtaggcagaatggctaatctaagcaagaatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gcagtcaaactccatgttcagcttttcagtaggcagaatggctaatctaagcaagaatag 650
Query: 181 ggaaaagaggaccttgttcatttgaaacaaccccactgcctgctgtaggtgtcagtaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ggaaaagaggaccttgttcatttgaaacaaccccactgcctgctgtaggtgtcagtaggt 590
Query: 241 ctgtgttttttt----cttattaccaagaggggaaaatgagttttttcttttttaatcaa 296
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ctgtg----tttgggccttattaccaagaggggaaaatgagttttttcttttttaatcaa 534
Query: 297 aaaagtccatgttaggctttaaattgcagaagagcaaagctagttctgatgtcccatgtc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aaaagtccatgttaggctttaaattgcagaagagcaaagctagttctgatgtcccatgtc 474
Query: 357 ccagtcattctagttacttcattggaagggtcctgtccttgtcttcttatacattaaccg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ccagtcattctagttacttcattggaagggtcctgtccttgtcttcttatacattaaccg 414
Query: 417 tccaggaatctagtcatctcagctgtttcctgtcctctagcaaaggtaggcctttttctt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tccaggaatctagtcatctcagctgtttcctgtcctctagcaaaggtaggcctttttctt 354
Query: 477 ggatggcctttacccagagctgaacccacttcctgttaggtttattagcctttgatgaaa 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ggatggcctttacccagagctgaacccacttcctgttaggtttattagcctttgatgaaa 294
Query: 537 tcttggtctttcaatcagacagtgttctcttggagtgtccagatctcaggtgccattgat 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tcttggtctttcaatcagacagtgttctcttggagtgtccagatctcaggtgccattgat 234
Query: 597 tatgtgacaactagccatgatctgacaaatagt 629
|||||||||||||||||||||||||||||||||
Sbjct: 233 tatgtgacaactagccatgatctgacaaatagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
