Query= MSMg01no502_a17.b1 MSMg01no502_a17.b1 CHROMAT_FILE:
MSMg01no502_a17.b1 PHD_FILE: MSMg01no502_a17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:59 2005
(646 letters)
>mm_chr12_95658655_95659701
Length = 1047
Score = 1062 bits (549), Expect = 0.0
Identities = 592/607 (97%), Gaps = 7/607 (1%)
Strand = Plus / Minus
Query: 1 tttcctgacccattgtgtttggcaccaggaaacaacttggcatggattgcagagagatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tttcctgacccattgtgtttggcaccaggaaacaacttggcatggattgcagagagatcc 545
Query: 61 atcagcaactgtgaaaactttatcacttcctgagcgcatgcatgcaggaagtggatgtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 atcagcaactgtgaaaactttatcacttcctgagcgcatgcatgcaggaagtggatgtaa 485
Query: 121 aaacaatgatttgtaaggggaaaggatgctaggtggtc-aaaaaatagacagtgtacatt 179
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 484 aaacaatgatttgtaaggggaaaggatgctaggtggtcaaaaaaatagacagtgtacatt 425
Query: 180 taacattattatgctatcctgtacaggcagcaaactagaaatccattgtacaaatacaca 239
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 taacatttttatgctatcctgtacaggcagcaaactagaaatccattgtacaaatacaca 365
Query: 240 aagac-tggt-ctcttactgaggacacaga-tcttcatagacaaacttaatcatacttat 296
||||| | | | ||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 364 aagacat--tacccttactgaggacacagact-ttcatagacaaacttaatcatacttat 308
Query: 297 acttatacttggtcatgcccattttgaatcttttgtgctggtactagaactcatggtttt 356
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 307 acttacacttggtcatgcccattttgaatcttttgtgctggaactagaactcatggtttt 248
Query: 357 gtgagttgttttcaacctacgtttcttgtaagattttaatagcagagtcaggctgtatag 416
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gtgagttgttttcaacctacatttcttgtaagattttaatagcagagtcaggctgtatag 188
Query: 417 tgcctgctttttaaatatgaagtcctgagtttatgtcctcagcacccagaaagagataga 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tgcctgctttttaaatatgaagtcctgagtttatgtcctcagcacccagaaagagataga 128
Query: 477 gcacatatacacacatgattatgtacatatcccaaacatatacacaaggataaaaatacc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gcacatatacacacatgattatgtacatatcccaaacatatacacaaggataaaaatacc 68
Query: 537 caatactttaagagtgtatcactgtgcatttaatatgagaaaggaaaagaacagtaaata 596
|||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||
Sbjct: 67 caatactttaagagtgtatcactgtgtatttaatttgagaagggaaaagaacagtaaata 8
Query: 597 atcatga 603
|||||||
Sbjct: 7 atcatga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1047
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1037
Effective search space: 659532
Effective search space used: 659532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_a17.g1 MSMg01no502_a17.g1 CHROMAT_FILE:
MSMg01no502_a17.g1 PHD_FILE: MSMg01no502_a17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:59 2005
(622 letters)
>mm_chr12_95491915_95492936
Length = 1022
Score = 1091 bits (564), Expect = 0.0
Identities = 609/624 (97%), Gaps = 4/624 (0%)
Strand = Plus / Plus
Query: 1 agcacatttttaagttatctggtaggagcattaagtccttgggtatagacaaactctgtg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcacatttttaagttatctggtaggagcattaagtccttgggtatagacaaactctgtt 260
Query: 61 taagttctagggggcactttctttccattttaaatatatgtcatatttattgtgtttgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 261 taagttctagggggcactttctttccattttaaatatatgtcatatttactgtgtttgga 320
Query: 121 tagaattttgagttgctgtttctagttaccaaagcacttttgaagatggggttcctaatt 180
|||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 tagacttttgagctgctgtttctagttaccaaagcacttttgaagatggggttcttaatt 380
Query: 181 tagtaaaaagtgtgtggaaaaatgtatttcctacaagtcataaaactttagtcttgcatc 240
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 tagtaaaaagtgtgtgg-aaaatgtatttcctacaagtcataaaactttagtcttgtatc 439
Query: 241 taagcaatattcttaagcaggagtcttaggttaaacatcttgattgaatcaaatattgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taagcaatattcttaagcaggagtcttaggttaaacatcttgattgaatcaaatattgcc 499
Query: 301 attagtatatacaataataaaaatcacctttctttctataaatttttcaccttcatggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 attagtatatacaataataaaaatcacctttctttctataaatttttcaccttcatggca 559
Query: 361 aagaatattatgattattttttgttttgtcttgc-ttttttttaaatgaaaattgtataa 419
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 560 aagaatattatgattattttttgttttgtcttgctttttttttaactgaaaattgtataa 619
Query: 420 gaaaattacttccat-gagtaccgaaaactatttgtatgtagtggcacctagcatgtgtg 478
||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gaaaattacttccattg-gtatcgaaaactatttgtatgtagtggcacctagcatgtgtg 678
Query: 479 aaagtcatttgataaacgcttactttatgagatgctaactgggttagcacacagacatac 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aaagtcatttgataaacgcttactttatgagatgctaactgggttagcacacagacatac 738
Query: 539 acatgcaagcaacaaacccatacaccccatacaaaatgtaggtcttgctcatagttacag 598
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 739 acatgcaagcaacaaccccatacaccccatacaaaatgtaggtcttgctcatagtaacag 798
Query: 599 tctattctgcaaggagggcatagc 622
||||||||||||||||||||||||
Sbjct: 799 tctattctgcaaggagggcatagc 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
