XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGTGATTTA
CATTATGCAATAAAACTAGAAGAGCAATTACAGGGTGAAATCTACCAAGA
CCACTCTTTAGTTTAAAAACAAAAATCTTACAATACAGTATTTTAAGTAT
CTAAATCACTGAATAGAGTGTCAACTGCAGCCCCTCATGAACCCACAGGT
GAATCTGAAGCACTTTTTTTTTGTCAAGAGTAAAAATCTCTTTGACATTC
AAACCTTTTGATAGGAAAAAATAAGGAGAAATAAAGATGGCTAGTTTGAG
ATTAATTTTCATCTCTTTATTGCAAATTGGAAAATCTAAGAAGTCAGAGG
AAGGTAGATAATGAGCCTGAAGATAATCAGATAATATGTTTCTAGGCATA
TTTATACATATGTCTTAAGAACTTAAATTCATAGTAGAGTAAGGCTGGTG
TCTTGGTCTCTGCTCAACTAATTGCTAAGGAGCTTAAGAAATAAGTCTTG
CTGGTACATACTTCAGTTCCAATCCAATTGTGACAGCAGGAACAAGGACA
CCAGAGTCCTTTCTGACCAGAGGCTCAGGTTACTTTTGATCTGTTCTGGT
GTACCTTGGTTTCAAAAAGACCAGACAGCTCCATGGTCCTCAAAGGAGAC
ACCACTTCCAGGCACTGTAACAACCTAGGATCTTAGGGCAATAGGATCTC
AGGATAATAGGAACTGGGTCATACCAGTATTTCAGGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXAGCAGAAACACTGTAGGAGGAACTGTGAGGCCACCTCTGCATA
AAAACCAGGGGCTACAGAGCCACAAAGGCACCTCCTGCAGAGGGACCAAA
TTGAAGATTGCCTGAGAGACCTAGGCTTGCTGGTACAGACAATGCCAGCC
AATGGGGAACTGCTGTTTAGAAGAGATGCTTTCTTGGGACCAATTGGGGC
ACATGTGGAGGGTATTGAAGGTGCTTGATGCAGTCTTCAGACAAGCTTGC
TGCTCCACTTCTCATTTGCTTCTGGAGTCTGTGCAGGGGAATCTATACCA
CTTCACCTCCAACACCCCAGTGCAAGTAGGGTCAAGCAGTGGGTCCAGGG
CACAGGCAGCATTTGGTGCCTAGCCTAATGTAGACAGACTACATTATCTT
TGTTTTGTGACTGCTTGCAAACCTCTTTTTCTGCAGGACTGTTTTTGCCT
CTTGCAGTAAGGACTGTGCTCACATTTCGATCTGCTCTGCTCTTCTTTTC
CTTGAAGTGCTTCTGTTGTTCCCCTTCAGTTGGCCACTTAGTATTTTATG
GTGGTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT
CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCT
TT

Query= MSMg01no502_j06.b1 MSMg01no502_j06.b1 CHROMAT_FILE:
MSMg01no502_j06.b1 PHD_FILE: MSMg01no502_j06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:39 2005
         (486 letters)



>mm_chr12_39740338_39741223
          Length = 886

 Score =  909 bits (470), Expect = 0.0
 Identities = 482/486 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttatgcaataaaactagaagagcaattacagggtgaaatctaccaagaccactctttagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 686 ttatgcaataaaactagaagagcaattacagggtgaaatctaccaagaccactttttagt 627

                                                                       
Query: 61  ttaaaaacaaaaatcttacaatacagtattttaagtatctaaatcactgaatagagtgtc 120
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ttaaaaacaaaaagcttacaatacagtattttaagtatctaaatcactgaatagagtgtc 567

                                                                       
Query: 121 aactgcagcccctcatgaacccacaggtgaatctgaagcactttttttttgtcaagagta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 aactgcagcccctcatgaacccacaggtgaatctgaagcactttttttttgtcaagagta 507

                                                                       
Query: 181 aaaatctctttgacattcaaaccttttgataggaaaaaataaggagaaataaagatggct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aaaatctctttgacattcaaaccttttgataggaaaaaataaggagaaataaagatggct 447

                                                                       
Query: 241 agtttgagattaattttcatctctttattgcaaattggaaaatctaagaagtcagaggaa 300
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 agtttgagattaatttccatctctttattgcaaattggaaaatctaagaagtcagaggaa 387

                                                                       
Query: 301 ggtagataatgagcctgaagataatcagataatatgtttctaggcatatttatacatatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ggtagataatgagcctgaagataatcagataatatgtttctaggcatatttatacatatg 327

                                                                       
Query: 361 tcttaagaacttaaattcatagtagagtaaggctggtgtcttggtctctgctcaactaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tcttaagaacttaaattcatagtagagtaaggctggtgtcttggtctctgctcaactaat 267

                                                                       
Query: 421 tgctaaggagcttaagaaataagtcttgctggtacatacttcagttccaatccaattgtg 480
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tactaaggagcttaagaaataagtcttgctggtacatacttcagttccaatccaattgtg 207

                 
Query: 481 acagca 486
           ||||||
Sbjct: 206 acagca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space:   416976
Effective search space used:   416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)