Query= MSMg01no502_k15.b1 MSMg01no502_k15.b1 CHROMAT_FILE:
MSMg01no502_k15.b1 PHD_FILE: MSMg01no502_k15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:46 2005
(680 letters)
>mm_chr12_111373341_111374418
Length = 1078
Score = 717 bits (371), Expect = 0.0
Identities = 399/409 (97%), Gaps = 2/409 (0%)
Strand = Plus / Minus
Query: 272 ctttcttacatagctcagatccacctgcctaggtatggtgctgcccacagtgggctgggc 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1078 ctttcttacatagctcagatccacctgcctaggtatggtgctgcccacagtgggctgggc 1019
Query: 332 cctcccaccaaccatcagctaagacaatttctcacagatgtggccacaggaaatctgatc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 cctcccaccaaccatcagctaagacaatttctcacagatgtggccacaggaaatctgatc 959
Query: 392 tggcgactccacatttgaggttctgtcttcccaggtgactctaggttgtatcaagctgac 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 tggcgactccacatttgaggttctgtcttcccaggtgactctaggttgtatcaagctgac 899
Query: 452 aataaagaccagccagcacactggactggtgggtttaaaatgcagcattttaatgtttct 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 aataaagaccagccagcacactggactggtgggtttaaaatgcagcattttaatgtttct 839
Query: 512 aattcataacattgagactgtgctggccttccacgggctggaggtcatgtgactggctgg 571
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 838 aattcataacattgagactgtgctggctttccacgggctggaggtcatgtgactggctgg 779
Query: 572 tcatgcacttcatttccttttgtccttgtggctttcatgattttctctttgtcttttagc 631
|| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||||
Sbjct: 778 tcgtgcacttcatttccttttctcctcgtggctttcatgattttctctttgtc--ttagc 721
Query: 632 tgctggtcgatttgttggcatctgccttacttaggatcccactgctgtg 680
||||| | |||||||||||||||| |||| |||||||||||||||||||
Sbjct: 720 tgctgattgatttgttggcatctgtcttagttaggatcccactgctgtg 672
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1078
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1068
Effective search space: 715560
Effective search space used: 715560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_k15.g1 MSMg01no502_k15.g1 CHROMAT_FILE:
MSMg01no502_k15.g1 PHD_FILE: MSMg01no502_k15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:46 2005
(241 letters)
>mm_chr12_111205732_111206364
Length = 633
Score = 393 bits (203), Expect = e-114
Identities = 228/241 (94%), Gaps = 10/241 (4%)
Strand = Plus / Plus
Query: 1 tggatctcagactacagatatgccacacctgggagttacctgctaagggccagccaccga 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 tggatctcagactacagatatgccacacctgggaggtacctgctaagggccagccaccga 260
Query: 61 caccagggtcctcgtccttctgaaaccgccatggtcacggtggtagccagccttttcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caccagggtcctcgtccttctgaaaccgccatggtcacggtggtagccagccttttcctc 320
Query: 121 atctgaacctgatctgtagtgccctgggtatcacagcctaccccgaccgctgcagagagt 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 atctgaacctgatctgtagtgccctgggtatcatagcctaccccgaccgctgcagagagt 380
Query: 181 tcgtgcggg-ggtggggtaagggggtgggggctttccactcaggtacacggcaggcccga 239
|||||| || || ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 tcgtgccggagg--------ggggg-gggggctttccactcaggtacacggcaggcccga 431
Query: 240 g 240
|
Sbjct: 432 g 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 633
Length adjustment: 9
Effective length of query: 232
Effective length of database: 624
Effective search space: 144768
Effective search space used: 144768
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
