GACTCACTATATTGAGAGGATCCGCGGAATTCAGAACTCTTCAGCTGGGG
AATGGTGGTAATGAAGTGTTCCCGTAAAACAGACTGTTGAGAAGGATTCA
ACTGCGTGAATTCAGAACTCTTCAGCTGGGGAACAGGGTACCCGTAAGTA
TAGCTTTACAAGGTACGTCTGGCCTTGAACTTTCTAACGAAATTCAAGAC
AGTCTATCAGAAGTAAAGTGGGAAATAGCTTTACAAGGTAAGTCTGGTCT
TGAACTTTCTAACGAAATTCAAGAAAGTCTATCAGAAGTAAAGTGGGAAA
TAGCTTTACAAGGTAAGTCTGGTCTTGAACTTTCTAACGAAATTCAAGAC
AGTCTATCAGAAGTAAAGTGGGAAATAGCTTTACAAGGTATGTTTGGCCT
TGAACTTTCTCTAGTGTTAGGAGCCTTTTTGTTCTTTTTCACATGTTATC
AAGTGGTTAAGGCAGGGCTGAAAATTCTGGATGAAATTCAGGGCAATCTA
TCAGAAGTAAAGCGGGGAGAGAGAGTAGGAGCAAAGAGGAAATATGGTTC
ACAAAATAAGTATACAGGCCTTTCCACGGGTCTTGAACCCGAGGAAAAGT
TTAGGTCAGGTAAGAATACCTGGGGAGAGATTAGAAGGAAGGAGAAGGAA
AAAGAANAGAAAAAAGATCAATCAGTGGAGGTCTCTAGGAGAAGGAGCCT
ATACTCATCACTAGGTGAGCTCTAGGAGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXCATTCAAATATGTCATCTCAGCCCCACTGTGTTTGTCTAAC
TTGGATTTTGCAGGCAGGAAAGGGGGAAGGGAGGATGACATGCTCCTTAG
CTGGGCTAGTTTGGAAAGGGGAACTTGACAGGGTGGAGTACACTTTTGTA
GTGTGTAATTTATGCTTTCTTTTCAAACAGAACAACCAGGACACTTAGGC
TTTGCGTTGCTTACGACCAGTGGCTGAAATGAACATCAACTATTTTTATA
AGTGGAGCTGAGATTTGAAATGAAATGAAACAGTTTAAAGACCACTGGGT
TTGAATGTATGTGTTTAGTGAATGTGAACAAAAGAGCCAAAAGATTACCT
TCCTTTCANAACGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAATGC
CCACACCTGTGCATTCCTGTGTCTGTGTGCACTCATTTGAGTGTAGGCTT
TTGGATTTTAAATATTCTTATGAAATGTTTTGGAGCTCAATTATTTCCAT
ACTCAAATGATTTAGCTAGGTAAGTGGTGGAATGGGTTTCATAACTTGAA
ATAAGTTTTTTTTTAAATTGTATTGGGTTAAAGAGATACTTAATGGTTTC
ATTGCGGTTTATTTATTGCTGGTAAAAGTTGTTGTAACTTTCTTTAAGGC
AGATAATCCAATGATTGTGAAATACTCAAAAAGCCAATAAAGTGTCAATG
AGCGTG

Query= MSMg01no502_m23.g1 MSMg01no502_m23.g1 CHROMAT_FILE:
MSMg01no502_m23.g1 PHD_FILE: MSMg01no502_m23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:56 2005
         (559 letters)



>mm_chr12_39570509_39571468
          Length = 960

 Score = 1017 bits (526), Expect = 0.0
 Identities = 547/555 (98%), Gaps = 3/555 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cattcaaatatgtcatctcagccccactgtgtttgtctaacttggattttgcaggcagga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattcaaatatgtcatctcagccccactgtgtttgtctaacttggattttgcaggcagga 260

                                                                       
Query: 61  aagggggaagggagg-atgacatgctccttagctgggctagtttggaaaggggaacttga 119
           ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 aagggggaagggagggatgacatgctccttagctgggctagtttagaaaggggaacttga 320

                                                                       
Query: 120 cagggtggagtacacttttgtagtgtgtaatttatgctttcttttcaaacagaacaacca 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagggtggagtacacttttgtagtgtgtaatttatgctttcttttcaaacagaacaacca 380

                                                                       
Query: 180 ggacacttaggctttgcgttgcttacgaccagtggctgaaatgaacatcaactattttta 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 ggacacttaggctttgcgttgcttacgaccagtggctgaaatgaacatcaactgttttta 440

                                                                       
Query: 240 taagtggagctgagatttgaaatgaaatgaaacagtttaaagaccactgggtttgaatgt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taagtggagctgagatttgaaatgaaatgaaacagtttaaagaccactgggtttgaatgt 500

                                                                       
Query: 300 atgtgtttagtgaatgtgaacaaaagagccaaaagattaccttcctttcanaacggggtg 359
           |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||  ||
Sbjct: 501 atgtgtttagtgaatgtgaacaaaagagccaaaagattaccttcttttcaaaacgg--tg 558

                                                                       
Query: 360 tgtgtgtgtgtgtgtgtgtgtgtgtaaaatgcccacacctgtgcattcctgtgtctgtgt 419
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 559 tgtgtgtgtgtgtgtgtgtgtgtgtaaaatgaccacacctgtgcattcctgtgtctgtgt 618

                                                                       
Query: 420 gcactcatttgagtgtaggcttttggattttaaatattcttatgaaatgttttggagctc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gcactcatttgagtgtaggcttttggattttaaatattcttatgaaatgttttggagctc 678

                                                                       
Query: 480 aattatttccatactcaaatgatttagctaggtaagtggtggaatgggtttcataacttg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aattatttccatactcaaatgatttagctaggtaagtggtggaatgggtttcataacttg 738

                          
Query: 540 aaataagtttttttt 554
           |||||||||||||||
Sbjct: 739 aaataagtttttttt 753


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 960
Length adjustment: 10
Effective length of query: 549
Effective length of database: 950
Effective search space:   521550
Effective search space used:   521550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)