CCCCTTTTTTCCTCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTT
CTAGGATCCGCGGAATTCTCCATAATTTACTGATTCATGAATTCTTGGAT
TTTATATTATTACTTAAAGGTTACATTTATGTTAATGAATTGACGTAAAA
TTGGGCTATGTCACTAAGGCCTTGTCACATACGTAATAAAGGATGATGTT
ATCATGAAAATAGCTTTTTAATCAAGTTACTAGTACAATACTCCCAGTTT
TTAATTAAATGAAGCAGAATATCTAAAGTAAGTGATACATAATGAACATA
TGGTAATTTGTTAAAGTATCCAGAATTGTTAAATATGTTCTTAATTAATT
AATATTAACACATCAAGTAAAACAAATGATGGGAAAAGGAGCCTATGAAA
CAAAATATATGCAGTTTAAAAGCTGTATGCCATAAAAGGACAAATTAACT
AGAAACTTCACAGAATTTCAGAATATGTACTCTGTACAGTAATGCATCTA
TGGCTCTTATGTTACCATTAGATATAAATTGTCCTTACACCTTCTTTTCT
ACTCTGAAAGTACATTTTTTCATAAAACCTAGACCAAATGTTTGTTAATA
AATGTTAGGTTAGCCACAACATGCCAACAATAACTGTAATACTTCATAGC
TCCAAAGCGCATCGATTTTATCTCACAGAAGTCTTCCAGTATTTTATGTA
CTTTCAATAAATA

CATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCCTTGTAAATTGTGGTAAAATAGGATA
GGATGACACTAAGCAACTCATTTGTCTCTTTGGTAATAGTATGATTAGAA
ATGTCAGCTATTCGTTATCTCTTCCAGCACCACCTGAGAGTATACCTGCT
CTCTCTTTCTATCATTTCATTTTATGTTTTAAATCTCATGTGAGGGTATA
TTCTAGGATATCCACTTGGTCCACTGAGGTCTAGATAAGAAGAGCAATTG
TCCCTATTAATCACTCACTCCTGCAGAGTAAAAGAAAACCCATGAGACTC
AGGCTAGAAATAAACCTTTTATATAGAAACTAACAGGGTTCACAATAATG
CTTTCCAAGGTTATAGAAAGAGTGAACAATTTCTCAGGTCAGGGAGGGGG
GATTATCTAACCAGCCAAATTACCAAAATGTTTATTAGCTGTGTAAAGCT
CTTACAGTCACCATTCCTCAAATTGCATCTTCTCTTACGTAGATGCTTTT
GAGAGTGCCATACTCTTGAAACTAATAAACTTACAAGTTCACTAAGATAA
CCTCAGAGAAGATTTTTTTTTCATCTATTTCAAGTAAATTTTCTATCTCT
GGAGAATGTATGCTTGTACATTCGTGTTTCCCCAGAAACT

Query= MSMg01no503_j06.b1 MSMg01no503_j06.b1 CHROMAT_FILE:
MSMg01no503_j06.b1 PHD_FILE: MSMg01no503_j06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:54 2005
         (341 letters)



>mm_chr12_62266385_62267125
          Length = 741

 Score =  621 bits (321), Expect = 0.0
 Identities = 336/341 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaattcttggattttatattattacttaaaggttacatttatgttaatgaattgacgt 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atgaattcttgcattttatattattacttaaaggttacatttatgttaatgaattgacgt 482

                                                                       
Query: 61  aaaattgggctatgtcactaaggccttgtcacatacgtaataaaggatgatgttatcatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaaattgggctatgtcactaaggccttgtcacatacgtaataaaggatgatgttatcatg 422

                                                                       
Query: 121 aaaatagctttttaatcaagttactagtacaatactcccagtttttaattaaatgaagca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaatagctttttaatcaagttactagtacaatactcccagtttttaattaaatgaagca 362

                                                                       
Query: 181 gaatatctaaagtaagtgatacataatgaacatatggtaatttgttaaagtatccagaat 240
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 361 gaatatctaaagtaagtgatacataaggaacatatggtaatttgttaaagtatccagaat 302

                                                                       
Query: 241 tgttaaatatgttcttaattaattaatattaacacatcaagtaaaacaaatgatgggaaa 300
           ||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 301 tgttaaatatgttgttaattaattaatattaagacatcaagtaaaacaaatgatgagaaa 242

                                                    
Query: 301 aggagcctatgaaacaaaatatatgcagtttaaaagctgta 341
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggagcctatgaaacaaaatatatgcagtttaaaagctgta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space:   243024
Effective search space used:   243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no503_j06.g1 MSMg01no503_j06.g1 CHROMAT_FILE:
MSMg01no503_j06.g1 PHD_FILE: MSMg01no503_j06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:54 2005
         (492 letters)



>mm_chr12_62096946_62097837
          Length = 892

 Score =  932 bits (482), Expect = 0.0
 Identities = 488/490 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccttgtaaattgtggtaaaataggataggatgacactaagcaactcatttgtctctttgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccttgtaaattgtggtaaaataggataggatgacactaagcaactcatttgtctctttgg 260

                                                                       
Query: 61  taatagtatgattagaaatgtcagctattcgttatctcttccagcaccacctgagagtat 120
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 taatagtatgattagaaatgtcagctattcgttatctcttccagcacaacctgagagtat 320

                                                                       
Query: 121 acctgctctctctttctatcatttcattttatgttttaaatctcatgtgagggtatattc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acctgctctctctttctatcatttcattttatgttttaaatctcatgtgagggtatattc 380

                                                                       
Query: 181 taggatatccacttggtccactgaggtctagataagaagagcaattgtccctattaatca 240
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taggatatccacttagtccactgaggtctagataagaagagcaattgtccctattaatca 440

                                                                       
Query: 241 ctcactcctgcagagtaaaagaaaacccatgagactcaggctagaaataaaccttttata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcactcctgcagagtaaaagaaaacccatgagactcaggctagaaataaaccttttata 500

                                                                       
Query: 301 tagaaactaacagggttcacaataatgctttccaaggttatagaaagagtgaacaatttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagaaactaacagggttcacaataatgctttccaaggttatagaaagagtgaacaatttc 560

                                                                       
Query: 361 tcaggtcagggaggggggattatctaaccagccaaattaccaaaatgtttattagctgtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcaggtcagggaggggggattatctaaccagccaaattaccaaaatgtttattagctgtg 620

                                                                       
Query: 421 taaagctcttacagtcaccattcctcaaattgcatcttctcttacgtagatgcttttgag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taaagctcttacagtcaccattcctcaaattgcatcttctcttacgtagatgcttttgag 680

                     
Query: 481 agtgccatac 490
           ||||||||||
Sbjct: 681 agtgccatac 690


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space:   425124
Effective search space used:   425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)