TCCCAAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTTTGTTCTCTTCTGAGCCCCATTTTTTAATGGGGTTA
TTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATAT
TAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTG
GTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGG
AGTTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGAGCAAGCCAT
TGCTGTTCTGTTCAGGAATTTTTCCCCTGTACCCATATCTTCAAGGCTTT
TCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGT
TCCTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATC
GATTCGCATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGT
TGAAAATGCTGTCTTTCTTCCACTGGATGGTTCCGAAGGTAGTGAGTTAT
CTCAATTGATTGTTCACAGTCAGTTACAGATTGAACTCCTGTTTGAGACT
TTCAATGTGTTTGCTGTATCATTTAGTTGTTGGGAAGCTCAAAACTTGGA
TGCCTATATAACATTAACATGATTAATGGGTACAGCATCCAAACACTGAA
CATCCTCCAAACATACTGAGGACTACAGACATCTGGCTC

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCCTTGCCAGTTGTTCCCTGGGATTCCTCA
GCATATCTTAGGTCAATTACTAGTTTCCTGGTTGGTTGGTTTTTCTAGTT
TTTCAAGGAACAGTCCAAGCTCAGGAGAAATTCCAAAACCAAATCAATTA
AAACATTTTCTATTTCTGTGTTAGATGTTATGATAAAAGATCCATTTTAA
TTAAAAGTGTTTTATCTCCTGTGCCATTTGGCAATGTACCTCCTATTGAA
ATCAGAGCAGTTAGTGCTTTGCTTGGTCTAACAGAGCTTTAGCAATATGG
GATAAGATGACATTAATTATGTATTTCATCTTTGGGTTTGATCTCCTGTT
TGCTTTTGGGGATCTACTCATCAAGTGGGGAAATTGAAGCTTAGTGGTCT
TAAAGAGAGTGAAAATGGATGTGCCCAGGTCACTGCTATTATGCTAACTG
ATATTGAAACACTTGCGACCATCCATTTAGATAGATTCAATTACAAAGAA
GAGTTGATATGGAACCAATCAATTGAGTCACAGATTGGTGACTCATAATA
TGGTTTTATGTTTAAATACAATAGACCTAGTTTAGTATCCTTCATGGGAA
ACCTAACTGATAATAAGCCTGGTGGTGTCAACAATAAAATGGATCATTTT
ACAGAACATTTCATGACTAAAGCATTTTCTTCTACTGATGTA

Query= MSMg01no504_l08.g1 MSMg01no504_l08.g1 CHROMAT_FILE:
MSMg01no504_l08.g1 PHD_FILE: MSMg01no504_l08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:23 2005
         (556 letters)



>mm_chr12_63950018_63950973
          Length = 956

 Score =  787 bits (407), Expect = 0.0
 Identities = 436/457 (95%), Gaps = 18/457 (3%)
 Strand = Plus / Minus

                                                                       
Query: 100 tcaggagaaattccaaaaccaaatcaattaaaacattttctatttctgtgttagatgtta 159
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 tcaggagaaattccaaaaccaaatcaattaaaacattttctatttctgtgttagatgtta 872

                                                                       
Query: 160 tgataaaagatccattttaattaaaagtgttttatctcctgtgccatttggcaatgtacc 219
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 tgataaaagatctattttaattaaaagtgttttatctcctgtgccatttggcaatgtacc 812

                                                                       
Query: 220 tcctattgaaatcagagcagttagtgctttgcttggtctaacagagctttagcaatatgg 279
           ||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
Sbjct: 811 tcctattgaaatcagagcagttagtgctttgcttggtctaacagagcattagcaa----- 757

                                                                       
Query: 280 gataagatgacattaattatgtatttcatctttgggtttgatctcctgtttgcttttggg 339
                        |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 -------------taattatgtatttcatctttgggtttgatctcctgtttgcttttggg 710

                                                                       
Query: 340 gatctactcatcaagtggggaaattgaagcttagtggtcttaaagagagtgaaaatggat 399
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gatctacttatcaagtggggaaattgaagcttagtggtcttaaagagagtgaaaatggat 650

                                                                       
Query: 400 gtgcccaggtcactgctattatgctaactgatattgaaacacttgcgaccatccatttag 459
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gtgcccaggtcactgctattatgctaactgatattgaaacacttgcgaccatccatttag 590

                                                                       
Query: 460 atagattcaattacaaagaagagttgatatggaaccaatcaattgagtcacagattggtg 519
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 atagattcaattacaaagaagagttgatatggaaccaatcaattgagtcacagattggtg 530

                                                
Query: 520 actcataatatggttttatgtttaaatacaatagacc 556
           |||||||||||||||||||||||||||||||||||||
Sbjct: 529 actcataatatggttttatgtttaaatacaatagacc 493


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space:   516516
Effective search space used:   516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)