Query= MSMg01no506_h07.b1 MSMg01no506_h07.b1 CHROMAT_FILE:
MSMg01no506_h07.b1 PHD_FILE: MSMg01no506_h07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:40 2005
(563 letters)
>mm_chr12_39994995_39995958
Length = 964
Score = 1029 bits (532), Expect = 0.0
Identities = 556/564 (98%), Gaps = 1/564 (0%)
Strand = Plus / Minus
Query: 1 aggatcttctacctttgtttctccagagttcgagggataagaaaagactatcacatccaa 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 764 aggatcttctacctttgtttctccagagttcgaggcataagaaaagactatcacatccaa 705
Query: 61 ctatttctgatacataacacagtaaactaacattatctatgatcatgtgcttttttagtc 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 ctatttctgatacctaacacagtaaactaacattatctatgatcatgtgcttttttagtc 645
Query: 121 ttataatttaaaccactaaaacaccaaataccaaatagtattatagaaaaccataatatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ttataatttaaaccactaaaacaccaaataccaaatagtattatagaaaaccataatatc 585
Query: 181 tttaaaaatacctataatgtgaacattaagagcatacttaatgttctcaatcactgcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tttaaaaatacctataatgtgaacattaagagcatacttaatgttctcaatcactgcaat 525
Query: 241 tataaagtatttgttaaatcacattcttggtaccaagaagaaccaatattaaattcaaag 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tataaagtaaaggttaaatcacattcttggtaccaagaagaaccaatattaaattcaaag 465
Query: 301 aagttatagtaactcagtgaatggttctaaagactcaaaggtattatataaactacttg- 359
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 464 aagttatagtaactcagtgaatggttctaaagactcaaaggtattatacaaactacttga 405
Query: 360 aaaaaaaagaaaggttcaagataattagctgccatttgtccttgtgattcacatgaaaat 419
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 404 aaaaaaaagaaaggttcaagataattatctgccatttgtccttgtgattcacatgaaaat 345
Query: 420 actctgctacttggggaaagggcaagtatcacgtttcggcagaagccaacagagtcttgc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 actctgctacttggggaaagggcaagtatcacgtttcggcagaagccaacagagtcttgc 285
Query: 480 tataacctggtttctgcatccatggcaggagcaaactgtctgttgatatttcagacacac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tataacctggtttctgcatccatggcaggagcaaactgtctgttgatatttcagacacac 225
Query: 540 cacaatattaactgactgctgata 563
||||||||||||||||||||||||
Sbjct: 224 cacaatattaactgactgctgata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 964
Length adjustment: 10
Effective length of query: 553
Effective length of database: 954
Effective search space: 527562
Effective search space used: 527562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no506_h07.g1 MSMg01no506_h07.g1 CHROMAT_FILE:
MSMg01no506_h07.g1 PHD_FILE: MSMg01no506_h07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:40 2005
(604 letters)
>mm_chr12_39869959_39870962
Length = 1004
Score = 1160 bits (600), Expect = 0.0
Identities = 603/604 (99%)
Strand = Plus / Plus
Query: 1 tgtttcatttttatttttctttttgtttgaggggacccatgtgtgggggagaagacctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtttcatttttatttttctttttgtttgaggggacccatgtgtgggggagaagacctga 260
Query: 61 gaggactgaaaagtgagggtgctcagggttcatcatgtgaaattcccaagtaatcaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaggactgaaaagtgagggtgctcagggttcatcatgtgaaattcccaagtaatcaataa 320
Query: 121 aaatattatacaaatatatgtaaataaagttaaaagtttaaatataagttccatcaatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatattatacaaatatatgtaaataaagttaaaagtttaaatataagttccatcaatag 380
Query: 181 catggttgcctttttccataaattagtaaggatcaattacagatggatttattaattact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catggttgcctttttccataaattagtaaggatcaattacagatggatttattaattact 440
Query: 241 caaaacaatccatataataagtaaatatgtttacagtaagtatgcatgtttatagatgag 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaaacgatccatataataagtaaatatgtttacagtaagtatgcatgtttatagatgag 500
Query: 301 gaaatttatggtcacaaagtttacttgcatttgtccactgtcacacaaatactctgaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaatttatggtcacaaagtttacttgcatttgtccactgtcacacaaatactctgaaaa 560
Query: 361 atacctagttaactaggtggatctttactaagtatggtagcttacagtacacacaaatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atacctagttaactaggtggatctttactaagtatggtagcttacagtacacacaaatca 620
Query: 421 tttcaactaattaccatacttcaaatcacatcaaagaaacattagtctttcatatttctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttcaactaattaccatacttcaaatcacatcaaagaaacattagtctttcatatttctt 680
Query: 481 tttttttccattttttattattctttaaagcatcttcgacttgccggtgatgtctatagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttttttccattttttattattctttaaagcatcttcgacttgccggtgatgtctatagg 740
Query: 541 tactacagctatagttatcctccacctgtgaacattctagtgacaggaagttttcctttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tactacagctatagttatcctccacctgtgaacattctagtgacaggaagttttcctttc 800
Query: 601 tttc 604
||||
Sbjct: 801 tttc 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
