Query= MSMg01no507_a07.b1 MSMg01no507_a07.b1 CHROMAT_FILE:
MSMg01no507_a07.b1 PHD_FILE: MSMg01no507_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:25 2005
(702 letters)
>mm_chr12_87980325_87981426
Length = 1102
Score = 1278 bits (661), Expect = 0.0
Identities = 694/709 (97%), Gaps = 7/709 (0%)
Strand = Plus / Plus
Query: 1 ccttttgaataccctatttcattacatctctcccagcataagaataacacacgtaaagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 ccttttgaataccctatttcattacatctctcccagcataagaataacacacgcaaagca 260
Query: 61 aacatatgctcacacacacagagacagacatggagacacaaagacagttctggcccatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacatatgctcacacacacagagacagacatggagacacaaagacagttctggcccatac 320
Query: 121 taaattggacaaaattgaaaggcagtgaagtttcatggacttttaaaatccttgtcataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaattggacaaaattgaaaggcagtgaagtttcatggacttttaaaatccttgtcataa 380
Query: 181 agaggtcgtcatttagatttgccagtgacacactgtaataatttgttatgcactgtttaa 240
||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 agaggtcatcatttagagttgccagtgacatactgtaataatttgttatgcactgtttaa 440
Query: 241 tttttaaaagttttgtgtgtatgcatgtgtgtttatagtttgcatgcatgatgtgctaca 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttttaaagttttgtgtgtatgcatgtgtgtttatagtttgcatgcatgatgtgctaca 500
Query: 301 cgtgtggaagtcaaaagacaacttgcaggagttggctctcttccaccacatgagcctagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgtgtggaagtcaaaagacaacttgcaggagttggctctcttccaccacatgagcctagg 560
Query: 361 actggaatcgagctgtcgcatctggcaaggagcaagcacttttatccactcagccatctc 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actggagtcgagctgtcgcatctggcaaggagcaagcacttttatccactcagccatctc 620
Query: 421 accagcactgttagaccctctcattaggattccattgggatcccctttaatgtcagaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 accagcactgttagaccctctcattaggattccattgggatcccctttaatgtcagaaac 680
Query: 481 tagatgtgtatgtcacctaccataacttccatccagtgtcatgctagaagtcttagcaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagatgtgtatgtcacctaccataacttccatccagtgtcatgctagaagtcttagcaat 740
Query: 541 tcagtaaattaaatatatatatatata-------tttatgtatatggatttttaaaacct 593
||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 741 tcagtaaattaaatatatatatatataatatatatttatgtatatggatttttaaaacct 800
Query: 594 acattatatataatacatatataatatgtattatagtatagtataaatatatatttacat 653
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 801 acattatatataatacatacataatatgtattatattatagtataaatatatatttacat 860
Query: 654 atttaaattacatattataatatcatatattgtactacattctataaat 702
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 atttaaattacatattataatatcatatattgtactacattctataaat 909
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 702
Length of database: 1102
Length adjustment: 10
Effective length of query: 692
Effective length of database: 1092
Effective search space: 755664
Effective search space used: 755664
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no507_a07.g1 MSMg01no507_a07.g1 CHROMAT_FILE:
MSMg01no507_a07.g1 PHD_FILE: MSMg01no507_a07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:25 2005
(234 letters)
>mm_chr12_88192029_88192662
Length = 634
Score = 412 bits (213), Expect = e-120
Identities = 228/237 (96%), Gaps = 7/237 (2%)
Strand = Plus / Minus
Query: 1 tctcatgcctggctgcttttccccatcctgtgctgaggctataacagggtggttccagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tctcatgcctggctgcttttccccatcctgtgctgaggctataacagggtggttccagag 352
Query: 61 ctgaccttaaagacctaaagggcctttctgtgaatgcaaggttactcagagagtcaagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ctgaccttaaagacctaaagggcctttctgtgaatgcaaggttactcagagagtcaagtt 292
Query: 121 ccttgtcaagaaggctagggggcttgctttatattccagggcaaatccatcaggctcacc 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ccttgtcaagaaggctagagggcttgctttatattccagggcaaatccatcaggctcacc 232
Query: 181 ggagatgagttgagctgtgacggggggtggg-------agggtaggggggtgcttac 230
||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 231 ggagatgagttgagctgtgacggggggtgggggtgggaatggtaggggggtgcttac 175
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
