Query= MSMg01no507_h07.b1 MSMg01no507_h07.b1 CHROMAT_FILE:
MSMg01no507_h07.b1 PHD_FILE: MSMg01no507_h07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:00 2005
(668 letters)
>mm_chr12_60900477_60901542
Length = 1066
Score = 905 bits (468), Expect = 0.0
Identities = 501/512 (97%), Gaps = 2/512 (0%)
Strand = Plus / Minus
Query: 157 gttccatttctaagcgcccagtcacagcctgctgctgaccaggcatttccttagtggtcc 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 gttccatttctaagcgcccagtcacagcctgctgctgaccaggcatttccttagtggtcc 810
Query: 217 tctagggaaagcattggccccataaccatttaattctctccaatcctcatactttctcaa 276
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 tctagggaaagcaatggccccataaccatttaattctctccaatcctcatactttctcaa 750
Query: 277 ttgatgtgtttacctcttttagttactttctggataaaatacaaatgatttaaaacaatt 336
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 ttggtgtgtttatctcttttagttactttctggataaaatacaaatgatttaaaacaatt 690
Query: 337 gatttgtgaacctgaaatggacaacgtcatgagttactggaatctaagtatttaactaat 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gatttgtgaacctgaaatggacaacgtcatgagttactggaatctaagtatttaactaat 630
Query: 397 gccttctaatatattgttaactggctatgcagaaacaacaggttagctaagttcaaattc 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gccttctaatatattgttaactggctatgcagaaacaacaggttagctaagttcaaattc 570
Query: 457 tagcaatttaaagtttaagactaaataaactacagagtgttgattatgtagaatacagac 516
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tagaaatttaaattttaagactaaataaactacagagtgttgattatgtagaatacagac 510
Query: 517 atgttttaagccagaaatatatctaggctatctagtatctatgatttttaattccataac 576
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 509 atgttttaagccagaaatatatctaggctatctaatatctatgatttttaattccataac 450
Query: 577 ttgcctgagagattttttttaaatatatatcaaccaagcaacaaacccaaataaagaagc 636
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 449 ttgcctgagaga-tttttttaaatatatatcaaccaagccacaaacccaaataaagaagc 391
Query: 637 ctttggtggaaattttttttaaatctatattt 668
|||||||||||| |||||||| |||||||||
Sbjct: 390 ctttggtggaaa-attttttaagtctatattt 360
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1066
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1056
Effective search space: 694848
Effective search space used: 694848
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_h07.g1 MSMg01no507_h07.g1 CHROMAT_FILE:
MSMg01no507_h07.g1 PHD_FILE: MSMg01no507_h07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:00 2005
(250 letters)
>mm_chr12_60868967_60869616
Length = 650
Score = 451 bits (233), Expect = e-131
Identities = 249/257 (96%), Gaps = 7/257 (2%)
Strand = Plus / Plus
Query: 1 ttaagcttattttgtttactttcttcattatttctcatgttcagttcattcaccaaatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ttaagcttattttgtttactttcttcattatttctcatgttcagttcattcaccaaatgg 253
Query: 61 gttagtacaagtttcttatcagaggtatctttagttgagagagagagagagagggagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 254 gttagtacaagtttcttatcagaggtatctttagttgagagagagagagagagagagaga 313
Query: 121 gagagagag-g-----gagagagagagagagagagatttttt-caatctctgtaaatagt 173
||||||||| | |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 314 gagagagagagagagagagagagagagagagagagatttttttcaatctctgtaaatagt 373
Query: 174 tttctagcactttatttcattactatttacaaacatttgcactatctgccagaatatgtg 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tttctagcactttatttcattactatttacaaacatttgcactatctgccagaatatgtg 433
Query: 234 attgaaactattgattt 250
|||||||||||||||||
Sbjct: 434 attgaaactattgattt 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 55
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
