Query= MSMg01no507_i05.b1 MSMg01no507_i05.b1 CHROMAT_FILE:
MSMg01no507_i05.b1 PHD_FILE: MSMg01no507_i05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:05 2005
(205 letters)
>mm_chr12_97144393_97144997
Length = 605
Score = 348 bits (180), Expect = e-100
Identities = 192/200 (96%), Gaps = 8/200 (4%)
Strand = Plus / Plus
Query: 7 gaattctatatgacaattccg----cctagataagaggaaaggcaggccaagagctgaaa 62
|||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctatatgacaa----gaaagcctagataagaggaaaggcaggccaagagctgaaa 262
Query: 63 attcaggttataaagattagaggggatgatttttaaaagaaaatgtaaggatcttttatc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 attcaggttataaagattagaggggatgatttttaaaagaaaatgtaaggatcttttatc 322
Query: 123 actaggtaactagagagattgggaacagggcagcagctaagttggcatgaagaacaacat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 actaggtaactagagagattgggaacagggcagcagctaagttggcatgaagaacaacat 382
Query: 183 ttttaacgttaataatcttc 202
||||||||||||||||||||
Sbjct: 383 ttttaacgttaataatcttc 402
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 205
Length of database: 605
Length adjustment: 8
Effective length of query: 197
Effective length of database: 597
Effective search space: 117609
Effective search space used: 117609
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no507_i05.g1 MSMg01no507_i05.g1 CHROMAT_FILE:
MSMg01no507_i05.g1 PHD_FILE: MSMg01no507_i05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:05 2005
(673 letters)
>mm_chr12_97176023_97177095
Length = 1073
Score = 704 bits (364), Expect = 0.0
Identities = 367/368 (99%)
Strand = Plus / Minus
Query: 306 tgtactcttgtgcaactacaacacgtgaagagtgcagaagcaagagaagcaagcaaatcc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1073 tgtactcttgtgcaactacaacacgtgaagagtgcagaagcaagagaagcaagcaaatcc 1014
Query: 366 ctggagttcattgcccattcagtacagctaaatatattagcatcacatttagtgaaaaac 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 ctggagttcattgcccattcagtacagctaaatatattagcatcacatttagtgaaaaac 954
Query: 426 ccttccaaaaacagtacggaaagaatgaaagaacacatctgacatcaaatctggggtcta 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953 ccttccaaaaacagtacggaaagaatgaaagaacacatctgacatcaaatctggggtcta 894
Query: 486 cgctcatacatgttcatacatacctacacacaaatgcattctcccacttaaatacatacc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 cgctcatacatgttcatacatacctacacacaaatgcattctcccacttaaatacatacc 834
Query: 546 tataccacacatgcacacagatattttaggaatacattcatttttctcttatcttgcaga 605
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 833 tataccacacatgcacacagacattttaggaatacattcatttttctcttatcttgcaga 774
Query: 606 ttttagatataacacatatataattgttttaattagaaatttggtttaaaaaaatctttc 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 ttttagatataacacatatataattgttttaattagaaatttggtttaaaaaaatctttc 714
Query: 666 ttttttct 673
||||||||
Sbjct: 713 ttttttct 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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