Query= MSMg01no507_j15.b1 MSMg01no507_j15.b1 CHROMAT_FILE:
MSMg01no507_j15.b1 PHD_FILE: MSMg01no507_j15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:12 2005
(644 letters)
>mm_chr12_72667599_72668642
Length = 1044
Score = 1205 bits (623), Expect = 0.0
Identities = 638/643 (99%)
Strand = Plus / Plus
Query: 2 accatgtctctcatgcctatgatgatcccacgggcaggtgtttagaaaatatagaaagtg 61
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 202 accatgtctctcatgcctatgatgatcccatgggcaggtgtttagaaaatatagaaagtg 261
Query: 62 gaaaaaggatgagctagctgggtatgagcactcctctctgcttctcactatggaggcaac 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gaaaaaggatgagctagctgggtatgagcactcctctctgcttctcactatggaggcaac 321
Query: 122 gtgaacagctagctacccacgtttctcactacagtgtctttccaggcatgatagacagta 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtgaacagctagctacccacgtttctcactacagtgtctttccaggcatgatagacagta 381
Query: 182 gcctcaaacggtgagctgaactaaacacttccttcctacgttattttctcccagatgttg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gcctcaaacggtgagctgaactaaacacttccttcctacgttattttctcccagatgttg 441
Query: 242 gtcacagcaatgagagaagtaattataatggttggtgccctccctactgtagttaaggag 301
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gtcacagcaatgagagaagtaattataatggttggtgccctccctactgtagttaaggat 501
Query: 302 cgaggatgcatgaaatatgtcctacaggcggccatgtggacctcagcaaattctaacggg 361
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 502 cgaggatgcatgaaatatgtcctacagacgtccatgtggacctcagcaaattctaacggg 561
Query: 362 gtgcagcaatgggacagaagccatcttgcataggctgaggagtgggaagccagagacagc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gtgcagcaatgggacagaagccatcttgcataggctgaggagtgggaagccagagacagc 621
Query: 422 aaagctaaatcacagttggcagccatgaagaggcactacagagcacactcctgagccaac 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 aaagctaaatcacagttggcagccatgaagaggcactacagagcacactcctgagccaac 681
Query: 482 agggactcttcctcaccagaagaaaggaggcaggcacaggtgcactttctgaggggtgag 541
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 682 agggactcttcctcaccagaagaaaggaggcaggcacaagtgcactttctgaggggtgag 741
Query: 542 ttcccttctgtgagtcgagggagggaaccacaggagagcgtgtgggttgggtacactgct 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ttcccttctgtgagtcgagggagggaaccacaggagagcgtgtgggttgggtacactgct 801
Query: 602 gcatcctcctttggaaatgcaatctgcctcgaggtaggtaaga 644
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 gcatcctcctttggaaatgcaatctgcctcgaggtaggtaaga 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_j15.g1 MSMg01no507_j15.g1 CHROMAT_FILE:
MSMg01no507_j15.g1 PHD_FILE: MSMg01no507_j15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:12 2005
(634 letters)
>mm_chr12_72834733_72835765
Length = 1033
Score = 911 bits (471), Expect = 0.0
Identities = 495/503 (98%), Gaps = 1/503 (0%)
Strand = Plus / Minus
Query: 1 atgaataataacaactttgtgagggtcaacatgacctgagcagagtactctgtctcatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atgaataataacaactttgtgagggtcaacatgacctgagcagagtactctgtctcatta 443
Query: 61 gatttgtctttgaacacaatcagcaagacgtctgtctggatggaatcttgtccaagcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gatttgtctttgaacacaatcagcaagacgtctgtctggatggaatcttgtccaagcttt 383
Query: 121 tccttttacatcattctaagttgggaagtctattgaaggttatctaactagggagagaaa 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 382 tccttctacatcattctaagttgggaagtctattgaaggttatctaactagggagag-aa 324
Query: 181 aaaatgttcattttgaagggaaatatagctaaacccatggacacctgtcacccaaaccac 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 323 aaaatgttcattttgaagggaaacatagctaaacccatggacacctgtcacccaaaccac 264
Query: 241 accaagttatagtggagcaatgacagtggtataataagtatgtattcaatatgaatacat 300
||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 263 accaagtgagagtggagcaatgacggtggtataataagtatgtattcaatatgaatacat 204
Query: 301 attcagaatctcactatgtagctcaggttgccattgaactcatgatcagtctcccgagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 attcagaatctcactatgtagctcaggttgccattgaactcatgatcagtctcccgagtg 144
Query: 361 ctaggattaggaacaggtacaatcatacacagctgctttcattttattcttaacactata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 143 ctaggattaggaacaggtacaatcatacacagctgctttcattttattcttaacattata 84
Query: 421 cattttcttttgaaatatctagtggtaaaaaaaatggacatcaaccagtcatcctatcca 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 aattttcttttgaaatatctagtggtaaaaaaaatggacatcaaccagtcatcctatcca 24
Query: 481 gcattggaagaaagttcaagcaa 503
|||||||||||||||||||||||
Sbjct: 23 gcattggaagaaagttcaagcaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1033
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1023
Effective search space: 638352
Effective search space used: 638352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
