Query= MSMg01no507_m12.b1 MSMg01no507_m12.b1 CHROMAT_FILE:
MSMg01no507_m12.b1 PHD_FILE: MSMg01no507_m12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:26 2005
(648 letters)
>mm_chr12_99045613_99046660
Length = 1048
Score = 1170 bits (605), Expect = 0.0
Identities = 638/649 (98%), Gaps = 1/649 (0%)
Strand = Plus / Plus
Query: 1 agtgaaaaagaattgccacaatgcctcttatagtaagtgtttatttgcctatacaagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgaaaaagaattgccacaatgcctcttatagtaagtgtttatttgcctatacaagcac 260
Query: 61 acacatgtatgcacccatgagaatacaccagggcacgcagttaatcagcagaactgcatt 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 acacatgtatgcacccatgagaatacaccagggcacgaagttaatcagcagaactgcatt 320
Query: 121 gttgttatctgtagaaggctgtgtttaatttaaaaatctactattgctttcagttggtct 180
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 321 gttgttatctgtagaatgctgtgtttaattttaaaatctactattgctttcagttagtct 380
Query: 181 tgctgttgggagaataaaaccatccagtgttctctctcagaaggagatgctgacactgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgctgttgggagaataaaaccatccagtgttctctctcagaaggagatgctgacactgga 440
Query: 241 agggataggatttaaagatcctgttgtctttttggaagaactattgtttctcattccatc 300
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agggataggagtcaaagatcctgttgtctttttggaagaactattgtttctcattccatc 500
Query: 301 tttaagaattgaccagcttgaggctagtgagcataccaaagcttcatgttaggtcatcac 360
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 tttaagaattaaccagcttgaggctagtgagcataccaaagcttcatgttaggtcatccc 560
Query: 361 tgaaaacacacatacaagtaacatcttgcagactgaacgagttagatttaggaattcata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgaaaacacacatacaagtaacatcttgcagactgaacgagttagatttaggaattcata 620
Query: 421 tatgcatacgtacatattcacattatgcataagatgataattaatgaaaccacaggctag 480
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 tatgtatacgtacatattcacattatgcatatgatgataattaatgaaaccacaggctag 680
Query: 481 atatttgaaagagagcaaggaggactagataggagtgcttgaaaggaaagaagagagggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atatttgaaagagagcaaggaggactagataggagtgcttgaaaggaaagaagagagggg 740
Query: 541 taaatgatataaatacattatcatctcaaatataaacataataaaataaataaaacctgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taaatgatataaatacattatcatctcaaatataaacataataaaataaataaaacctgt 800
Query: 601 cataaagtattaaaaatttgaaaaaaaaa-gttgaaaatacctacaaat 648
||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 801 cataaagtattaaaaatttgaaaaaaaaaagttgaaaatacctacaaat 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_m12.g1 MSMg01no507_m12.g1 CHROMAT_FILE:
MSMg01no507_m12.g1 PHD_FILE: MSMg01no507_m12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:26 2005
(239 letters)
>mm_chr12_99197723_99198361
Length = 639
Score = 437 bits (226), Expect = e-127
Identities = 235/238 (98%)
Strand = Plus / Minus
Query: 1 ttacttactggccctcacacccttcccagcatttgcttttctttacggggaccccctaaa 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttacttactggcccccacacccttcccagcatttgcttttctttacggggaccccctaaa 379
Query: 61 agcttcctcagacacatgactagggtgtggctatagtgcttggggtttggttttgaagtt 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 agcttcctcaggcacatgactagggtgtggctatagtgcttggggtttggttttgaagtt 319
Query: 121 gggatggcttccattatctggccagaagcacttttggaggatgaggaaggttaggatttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gggatggcttccattatctggccagaagcacttttggaggatgaggaaggttaggatttc 259
Query: 181 tgtaaacctcttagctattgttgtgactcgtttccttgtccttggccatttaaggatg 238
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 258 tgtaaacctcttagctattgttgtgacttgtttccttgtccttggccatttaaggatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
