Query= MSMg01no508_e19.b1 MSMg01no508_e19.b1 CHROMAT_FILE:
MSMg01no508_e19.b1 PHD_FILE: MSMg01no508_e19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:10 2005
(651 letters)
>mm_chr12_98178988_98180038
Length = 1051
Score = 1208 bits (625), Expect = 0.0
Identities = 642/649 (98%), Gaps = 4/649 (0%)
Strand = Plus / Plus
Query: 5 gaattcttgatttctccc--cattcagtttacttctttctcacccatcaactgcttagaa 62
|||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 205 gaattcttgatt--tcccatcattcagtttacttctttctcacccatgaactgcttagaa 262
Query: 63 ctgtgttttcctaaatcttcgacagttgcaaagaaaggaaattctctcttgcttttctta 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ctgtgttttcctaaatcttcgacagttgcaaagaaaggaaattctctcttgcttttctta 322
Query: 123 ttgcttcttagttatctgtgattccctctgtttttggctttgcagaacaccacttagcta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttgcttcttagttatctgtgattccctctgtttttggctttgcagaacaccacttagcta 382
Query: 183 atactttatgctacccataacatgaagagaaatgatttgtaattaaagacttaaatattt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atactttatgctacccataacatgaagagaaatgatttgtaattaaagacttaaatattt 442
Query: 243 taacaggctaccccaaatggtttctttataagctgtattgcagcagaatctttacatagc 302
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 443 taacaggctaccccaaatggtttcttaataagctgtattgcagcagaatctttacatagc 502
Query: 303 cgacttttcatttttcatttgtttaataaatcaacacgtattactttatattatattgtt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cgacttttcatttttcatttgtttaataaatcaacacgtattactttatattatattgtt 562
Query: 363 aaaggagacagagtagctattgaaattagatgatacaatcttggaatgggttaaatctta 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aaaggagacagagtagctattgaaattagatgatacaatcttggaatgggttaaatctta 622
Query: 423 ttttaaaattagcattattgcatattttaatagagcttaagacaaaaagttcacttttgg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttttaaaattagcattattgcatattttaatagagcttaagacaaaaagttcacttttgg 682
Query: 483 ctgattctgagttattttaataataaaaattcccatttaattgcaaagcacaagttattt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ctgattctgagttattttaataataaaaattcccatttaattgcaaagcacaagttattt 742
Query: 543 taaattttctccagagaaaagaaatctctgctgcaaaaatgatatcgctattatataaaa 602
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 taaactttctccagagaaaagaaatctctgctgcaaaaatgatatcgctattatataaaa 802
Query: 603 tttgctgaggaggacaataatgcctggctttcacatgggttctgatcac 651
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tttgctgaggaggacaataatgcctggctttcacatgggttctgatcac 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no508_e19.g1 MSMg01no508_e19.g1 CHROMAT_FILE:
MSMg01no508_e19.g1 PHD_FILE: MSMg01no508_e19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:10 2005
(580 letters)
>mm_chr12_98346339_98347318
Length = 980
Score = 919 bits (475), Expect = 0.0
Identities = 490/495 (98%)
Strand = Plus / Minus
Query: 85 ttagccttgtaaggtcagtgaaaaaaatgaatagtcctgtctcaaaacaaggtggaaaga 144
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 980 ttagccttgtaaggtcagtgaaaaaaatgaatagtcctgtctcaaaacaaagtggaaaga 921
Query: 145 aaggaccaaactttaaagttgttctctgacctctgcttttgtgctctgatatagaagtat 204
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 920 aaggaccaaactttaaagttgttctctgacctctgcttttgtgttctgatatagaagtat 861
Query: 205 gcactcacctacattccctcaagaacacatacatatgtatatacatgtatgcacatgtac 264
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 860 gcactcacctacattccctcaagaacacatacatatgtacatacatgtatgcacatgtac 801
Query: 265 acacatgtatacacacacagagcaaattaccaaaacccagagtagtatctggtgcagggt 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 acacatgtatacacacacagagcaaattaccaaaacccagagtagtatctggtgcagggt 741
Query: 325 cagtgataaataagcaaagttttaagggaaactgtcagaataattgactaaaagttactt 384
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cagtcataaataagcaaagttttaagggaaactgtcagaataattgactaaaagttactt 681
Query: 385 tgaataaatagtatgtctaaaaacagcatagaggcatattttcttcaaactttcaccaaa 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgaataaatagtatgtctaaaaacagcatagaggcatattttcttcaaactttcaccaaa 621
Query: 445 tttttgtaaaaggaaacatttatcgtctctttttatagaatcttgaaatacaatgtatga 504
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 620 tttttgtaaaaggaaacatttattgtctctttttatagaatcttgaaatacaatgtatga 561
Query: 505 aatttgtagttacaaattgtatgatatctccttgtgttattgtccacaaggtagggaaaa 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aatttgtagttacaaattgtatgatatctccttgtgttattgtccacaaggtagggaaaa 501
Query: 565 ggatcaatacaggtg 579
|||||||||||||||
Sbjct: 500 ggatcaatacaggtg 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
