TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACTGTGTATTCCAGGATGTGCCTAGTTGCAGTTTTCTGACATAGCC
TCCCAAATACTCAGATTGCAGACCTGCATCACCTACTATGCCTAGTTTTC
TTTGTAGAGTTTGATTATTTAGATTCTCTAGCAGTGGCTTTATTCTCAGA
AAGTTTATAAATTGTTGATTTGTCCATTTTCTTTTTTCTGCCACTTTTGC
TTTCTTTGAGGCTACAATCAATAGAAACGTGGAGCTGTCATCTAATTGGG
CTTCTTTTCATTAGTGTGCATGCTACATCTTTTCCACTCCTTATTTCAGT
CTTTCCGTAACCTGTGTTTTACACACACACACACACACACACACACACAC
ACACACACACACACACACACACACACACACACACACACACTTACTGCTTT
TGCTTTCTGGTCTGATAGTTTTCTGTATACAGAGGCAGTTAGTGCATTCA
TACCACATGTAACCTCTTGTTATTTGGAGCTTACACAGACCCATCTGGAC
ATCTGCTTTCTATTTGCCCCATCTGTCCTGTGTGCCTTCCTTATTTGTTT
GTTTGTTTTTTGTTTTTTGTTTTTTTTTCCAGACAGGGTTTCTCTGTGTA
GCTCTGGCTGTCCTGGAATTGTGAGTTTGAAGCCTGCCTGTTTAACATAG
TGAGTTCTAGGACAGCCCAAGATACATAGGAAACTCAGTCTCAAAACACC
ACCGCCTACAACAACAAAATCACATTGGGGCATAGATGTAACT

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTTAGTCATTGATTCACAACGTTTAAG
CAGGCCAAGTCTCTAGTAGCAAGTTTCTCTCTATGCTTGGCTGACCACAG
TCTGCACTTACTAAGGAATAGGTTAGTCTTAGTTTTGAAGTCTTGAACAG
ATAAACAGGTTCATCACCTGTTCTAGGTTCTATGTTCTTATAATAGAGTT
GTTCACTCTTTATTCATAACCTCCCTATTTTCTGATGCATAACAAAAACC
TCTCACCATATCCCTAAGTCACAAGACCAACAAACTCACACCCAACCTAG
AGTGTACAACTTCTTTGATCTTTAACTTGTCCCAAGCCTATTTCTCTTGC
TGCTATAGTTCTGGGCTTATAACCAGTGAGCGTTCCCTGTGCTCCTGTCT
CTCGTTCATGAAGATCTTGCCAGTCTACTCTAGACTTTCTATCCACTACC
CTAACTTTCCAAAATTACTTAAATCAAGTTAATTTCCTAAAACTACTTAA
ATCAAATTAGGAATTCCGTAAGACCATTAATTCATATAAATAGCATTATC
TCAAGAACTGTCATCTTCATGTTGATTGGCAAGAAACTTGCCCAGCAGCG
TGGCCTGTGACCCAGGAGTAATCACCCAGGCTATAGGCAGTGAGGGCCTC
CTGGTGTCACTCACACCAAGCCAATAATGGAGATATTGTGCAGGAATCTC
TCTACTCTATATGCCCCNCCATGAAACCCACCCATTATATGAATCATGCG
TGGGCN

Query= MSMg01no509_f23.b1 MSMg01no509_f23.b1 CHROMAT_FILE:
MSMg01no509_f23.b1 PHD_FILE: MSMg01no509_f23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:35 2005
         (616 letters)



>mm_chr12_70435524_70436539
          Length = 1016

 Score =  930 bits (481), Expect = 0.0
 Identities = 522/551 (94%), Gaps = 25/551 (4%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcactgtgtattccaggatgtgcctagttgcagttttctgacatagcctcccaaat 64
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gaattcactgtgtaggccaggatgtgcctagttgcagttttctgacatagcctcccaaat 467

                                                                       
Query: 65  actcagattgcagacctgcatcacctactatgcctagttttctttgtagagtttgattat 124
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 466 actcagattgcagacctgcatcacccactatgcctagttttctttgtagagtttgattat 407

                                                                       
Query: 125 ttagattctctagcagtggctttattctcagaaagtttataaattgttgatttgtccatt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ttagattctctagcagtggctttattctcagaaagtttataaattgttgatttgtccatt 347

                                                                       
Query: 185 ttcttttttctgccacttttgctttctttgaggctacaatcaatagaaacgtggagctgt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ttcttttttctgccacttttgctttctttgaggctacaatcaatagaaacgtggagctgt 287

                                                                       
Query: 245 catctaattgggcttcttttcattagtgtgcatgctacatcttttccactccttatttca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 catctaattgggcttcttttcattagtgtgcatgctacatcttttccactccttatttca 227

                                                                       
Query: 305 gtctttccgtaacctgtgttttacacacacacacacacacacacacacacacacacacac 364
           ||||||||||||||||||||||                        ||||||||||||||
Sbjct: 226 gtctttccgtaacctgtgtttt------------------------acacacacacacac 191

                                                                       
Query: 365 acacacacacacacacacacacacacacacacttactgcttttgctttctggtctgatag 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 190 acacacacacacacacacacacacacacacacttactgcttttgctttctggtctgataa 131

                                                                       
Query: 425 ttttctgtatacagaggcagttagtgcattcataccacatgtaacctcttgttatttgga 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ttttctgtatacagaggcagttagtgcattcataccacatgtaacctcttgttatttgga 71

                                                                       
Query: 485 gcttacacagacccatctggacatctgctttctatttgccccatctgtcctgtgtgcctt 544
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 70  gcttacacagacccatctggacatctgcttt-tatttgccccatctgtcctgtgtgcctt 12

                      
Query: 545 ccttatttgtt 555
           |||||||||||
Sbjct: 11  ccttatttgtt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 93
Number of extensions: 32
Number of successful extensions: 32
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space:   609636
Effective search space used:   609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)