BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-509J04.T7 (MSMg01no509_j04.b1) | MSMg01-509J04.TJ (MSMg01no509_j04.g1) |
ACC | AG583217 | AG583218 |
length | 747 | 567 |
length of high quality (start - end) | 189 (54 - 242) | 185 (56 - 240) |
definition | CHROMAT_FILE: MSMg01no509_j04.b1 PHD_FILE: MSMg01no509_j04.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:38:50 2005 | CHROMAT_FILE: MSMg01no509_j04.g1 PHD_FILE: MSMg01no509_j04.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:38:50 2005 |
singlet/doublet | singlet | --- |
---|
BLAST hit | unique | no hit data |
---|
sequence | NNNGGCATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTTTATTTACTTATTTAATTATTTTTATTATTAGAAAT
CCTTCAATAGTTTAAGTTGCTTGAAAGGCATCAAAGTTTTATTCACCTTT
CTTTCATTCTCTTCTCTGCCAGACTGTTAGCATGTGGCCCAGTCTCCATA
AACACAGAATGACTTGAATTAATACCAATCACTTGATTTGNANNGTTTAT
NTNNAGTCTTATAATGGTTAAAGGGAAATGGCTACAGATGATTTACACAG
CCCTTCTCACCTAAGAAAAGTATACTTGGATAAAAAAAAATTTTGTAAAA
CAAAAANGNNNNAAANNAAAAAANNTNNNNNNNNGAAAANNNNNNNNNNN
NNNNNGGNNNNANAANAAAAAAAAAAAGAGTTGGNTTNNNGGNGTAAATT
AATTTTTTTTATTTATGATAGAAGGGTGTATATTTTTTATTTGGAGTTGG
TAGTTTTTAGGTTTTGTATGTTTTTTGTTTTTTAGGTAGGGTTTGTTTGT
ATTTGTTTATTTTATTGGTAGATTTTTTTATTAGATAGTTTTTATTTGGG
TTAATTTTTTTTTTTTTTATGTGTTTGTGATGTGTTTTGTTTTTTTTTTT
TTGTTTTGGAGAGTTTTTTGGTTGGTTTTTTTAGGAGGTTTTTTTAGNTG
TGGATTATTTTTAAAATATTTTTTTAAAATTTGTTTATATTATTTTN
| NNTTCATCATGGTAGCTGGGGCGCCTGTCTCACTTAGGACTTGAATGTCC
GCGGATTCTATGATGATTATTGATCCAAGTCTTATAAAAATAATTTCTAT
ACTGTCATAAACTTCTCTGAAAAGGGTTGAATGAACACTTATTGATGGGC
GTAAATTATGTTATTAGGAGTCATTTAATTGCTATGTTCCTTTCAAAATA
ATAATGTTTTCTCCTAACCCCATGACCCTATCTAGTCTCAGTCTTGGTAC
TTTATCANNNNGGCCCCAAGGGGGANCCCCCCTGGCCCTTTNGAAAAAAA
AAAAAAATGGGGGCCCTCCCCCCAAAAAATCCCAAGGGTTTCCCCCCCGG
GGGGGTAAAAAAAAAATNTAAAAACAGTAAGGAAATATTTAAAAAAGGGT
TGTTTTTTTTCCCCCCCCCCCCCNNNCGGGCACCCGTGGGGTGGGCCCCG
GTTGATGGGAACGGTTTGGTAGGGGGGGTTCGCATTTGGTGTATCTTTTT
TTCCCCGTGTCTTTTTCCTGTTTTCTATTTTTAGGCGNATGTACGGNAGT
GGAGGCTGTTCGATTTA
|
quality values | Open.Hide. 0 0 0 3 6 6 6 9 10 14 10 9 9 9 10 12 27 32 37 30 30 22 22 30 31 29 28 29 37 37 37 41 46 28 25 23 19 15 7 6 6 6 6 6 8 15 21 23 22 22
22 21 26 30 46 44 44 35 31 31 28 28 28 47 39 37 25 18 10 9 9 9 10 15 23 28 40 39 39 43 43 48 48 57 59 57 57 57 57 57 57 59 57 57 57 57 47 32 34 39
36 32 28 31 25 28 42 42 68 68 68 68 68 68 68 68 57 57 47 47 47 57 57 68 68 57 59 43 42 42 42 42 43 44 44 68 68 68 68 68 57 57 57 47 47 57 57 59 57 57
57 57 57 57 57 57 57 50 46 48 48 48 48 48 48 48 48 57 57 57 54 57 57 68 68 68 68 59 59 43 43 47 59 57 57 44 41 23 23 31 23 44 23 27 28 32 32 35 44 44
46 37 37 30 30 25 43 43 68 43 43 39 40 40 44 44 53 53 53 57 57 44 43 37 35 35 32 41 32 32 30 33 33 33 33 33 33 21 23 3 0 3 0 0 3 14 15 19 18 3
0 3 0 0 3 14 10 6 6 8 19 27 41 18 11 12 11 9 9 17 13 15 11 15 15 15 15 13 16 16 12 12 16 37 36 36 43 39 40 43 48 48 43 43 35 35 31 28 23 28
14 14 23 24 28 22 16 19 15 16 16 19 15 15 11 11 11 12 19 18 16 12 9 9 9 12 10 10 10 8 8 8 8 12 19 13 18 9 9 9 9 9 7 8 9 9 8 8 11 9
8 8 21 19 15 3 0 3 0 0 0 0 3 11 3 0 0 3 10 8 8 8 3 0 0 3 0 0 0 0 0 0 0 0 3 11 9 9 3 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 3 3 0 0 0 0 3 0 3 3 0 3 9 7 6 6 6 6 6 6 6 9 9 9 9 8 8 8 3 0 3 3 0 0 0 3 3 0 3 8 10 8 10 10 10
11 11 19 12 8 8 8 8 8 6 7 8 12 8 8 8 8 8 8 8 12 12 12 12 12 12 10 8 8 8 8 10 8 10 10 11 10 8 8 8 8 8 6 6 8 6 8 8 6 8
8 8 8 8 16 18 24 11 11 13 13 9 12 8 10 8 10 8 8 8 8 8 10 10 6 7 7 6 10 15 15 10 10 13 9 9 9 7 7 8 9 9 8 8 8 8 7 6 7 6
8 8 15 9 9 9 12 11 11 9 8 8 6 6 6 8 10 10 6 6 6 6 6 11 22 32 20 17 10 9 9 6 6 6 7 8 6 10 10 15 9 8 8 8 10 9 9 7 7 7
15 8 8 8 8 8 8 11 8 11 10 13 8 8 8 8 8 8 8 8 8 8 8 8 11 6 6 6 6 6 6 7 9 9 8 10 18 10 10 8 10 10 10 14 16 22 20 13 8 8
8 8 8 8 15 15 8 8 6 7 6 6 6 8 15 21 9 9 8 8 8 8 8 8 9 9 8 8 11 13 10 13 11 11 11 10 10 10 10 10 10 10 9 9 9 10 3 0 3 13
8 6 6 6 6 6 6 8 8 10 12 12 9 9 6 8 6 6 8 8 17 19 12 13 8 8 8 8 8 8 8 8 9 8 8 8 9 9 14 13 13 10 10 8 8 3 0 | Open.Hide. 0 0 3 6 6 10 8 8 8 8 10 10 8 8 9 10 19 26 22 22 20 30 28 16 15 10 8 8 8 8 10 10 10 8 8 10 9 10 10 9 9 9 10 8 8 6 6 8 15 18
30 30 22 11 11 13 19 23 40 43 36 42 42 43 43 53 53 57 35 28 12 11 14 8 10 8 8 8 8 19 19 43 59 59 68 68 68 68 68 68 68 68 68 48 48 39 43 43 57 59
48 44 32 23 8 8 10 10 23 26 35 32 37 39 39 43 43 42 44 44 68 68 68 68 68 68 68 68 50 50 42 40 22 23 18 30 22 37 43 50 57 68 68 68 68 68 57 57 52 43
35 17 17 23 40 40 68 68 68 68 68 68 68 68 68 68 68 68 48 48 40 43 43 57 57 68 68 68 57 57 57 57 57 59 59 59 59 43 43 28 19 8 8 8 10 21 44 68 68 34
22 8 8 8 8 21 21 59 59 46 48 48 48 43 43 47 48 43 34 28 22 22 24 28 24 18 17 17 17 37 37 39 39 41 41 30 28 16 14 18 14 18 18 17 21 14 12 12 12 12
13 13 8 8 6 6 3 0 0 0 0 3 8 8 6 6 6 6 6 6 9 8 8 8 3 0 3 10 10 10 9 9 9 13 9 9 9 9 9 9 3 0 3 10 6 8 10 17 13 12
8 8 8 8 13 21 19 15 15 9 8 8 8 8 8 10 10 11 9 13 13 13 13 10 17 19 12 10 8 6 6 8 6 6 8 7 9 9 9 9 10 9 8 10 8 8 8 8 9 9
10 15 10 8 8 8 8 8 8 8 8 8 8 9 9 9 3 0 3 8 8 8 8 8 6 6 8 6 6 6 8 8 8 8 8 6 6 8 8 8 8 8 15 13 9 9 9 8 8 8
8 8 9 9 9 8 8 8 8 8 8 8 15 10 10 10 8 15 15 8 19 8 3 0 0 0 3 8 11 9 9 9 8 8 8 8 8 8 9 8 8 8 8 8 8 10 17 9 10 9
9 9 9 8 8 8 8 8 8 10 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 10 10 12 12 11 10 9 9 8 8 8 6 6 8 8 8 8 10 12 10 10 10 10 8
8 8 9 10 8 6 6 6 6 8 8 9 9 9 9 9 10 9 9 10 10 12 10 8 6 6 8 8 8 8 6 6 8 6 6 6 3 0 3 6 8 8 8 8 8 3 0 3 6 6
8 6 6 8 8 8 8 8 8 6 8 6 6 8 8 8 6 |