CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATTAGCGTTATCTTTGTTTAGGGTATAAAATCTACACATTAAATGG
CTGGAGTGGAGCGTTGATTTTTCTCTGGTCTAAACAAACCTCAAGTGGCT
GGAAAGGAAGTGGGCTGGATGGGAGTCGACCTGGGTCAGGGGGAATGGTT
TAGGAAGGACTGATTCAAGACTTAGAAGTTGCCCTTTCTGTGTTTTCTCT
GAGGACAGGTTGGTAGTTAGCCGGGCATCAGGTGAGTACTCTGGAATGGG
AATGGGAAGCTGGTAGAGAATGGGTACCACCTCACGTAACCATTGAAGCA
AGAGCCACACTTCTGAGTCATTGCATCTCTTGTCTGGAGATGAGGGAATT
CAGGACAGAGAGATCGGGCCACTTGCCTGAGGTGACAAGAACACTGAATC
AGGGACCACCAAGTCTGGCTTTCTTGGGAGCCTTGCACCTTGTCAAGATC
TATAGGATGTGTTGTGAGCTGAGCACAGGCAGCCCTTGGGGGNTGGTGGG
TGTTGCTCTCATTGAGACGGCCATCAGCACCAGAAACGTTGAGTAAGATG
TTGAAATGCAACAGCTCACACTGAGAGGCTTGAAGGATGCACATGCGTTC
ATTCTCACATGGCTCTGGATGCTATGAGTCTGACATCAAGGGTCAGGCAG
CTCTGACTCCTCCTGAGAGATGGGAGGGGCAGCGTTTCACTTCTGGCTCT
GN

CTATGCCCTCCTCATTGCAACCCCAAACCAAAACCCGCAGTCACAATAAC
GCTTTTACTAATATTATCAACATTGTTCTACGCAAAGACACAGGTCGAGG
CGGAAGGCGGACTAAACACGGCGGCCCGGTTTGTAAGTCACGGCATTTAT
CGGTATTACCCCAGTAACGATGTTCACGATTGCGCGGGCGGAGAAATAGG
TAGAAAATACGATCAGCTAACCAAAAGCGCAGTAGAATCGCCCATAGGAT
AGCACGCCGTTATCCCCGGGGGGGCCCATGATCCGAACAATCTTCGGGGG
CGTTTTTTTAGGGCACACAGATGCGGCTACTATACGAAGGGAATTCGANG
TCTGTAAATACCGGCCGTGGCGAATACGGAATACTGGGTAGCCCGAGCGT
TGGTGGTTTAATTGTTACACATACTCCTAACCAAAACATGAACGGCCTAT
TACCCACACGCGGTTAGGGTAAGAAAGAACGGACGGAGCTCCTTTACCGC
CCCATGAACGGTGATGAGTATTTTTGTACTGCGCGCCATTACGTTTGCTG
AATCCCGACCCGTTTTAATACACCCCTACTACTTTTCCCTCCGACGCACA
AANAAATTGGGGGACACCCGTGCCCCCCCTCTCGTTTACACTTTGTGTCA
GGTCCCCTGTATACCCCCGTTCTTTATAGACGCACAAGAGCGCAAAACCC
ATTGCCAAACCATATTTGTTTCTTTTCACATAATCCACACCTACTGTTTT
CACTTAAGACAAACGATACTCGTGTGGTTCGCTTAACGACGACCTCTTAT
CCCTTCACAGTACGGGAGGCACAAAACACTTTATGCGGTTGTCCGTTNGC
CGCGAAATTTATATAAGCTCACGCGCAATTAGTTTTGCGTAACAGCGGAA
CCGCAACTACAACACCTTGTCAGCGATACCGCAGCATACCAATATGACGT
AGATTN

Query= MSMg01no511_i22.b1 MSMg01no511_i22.b1 CHROMAT_FILE:
MSMg01no511_i22.b1 PHD_FILE: MSMg01no511_i22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:27 2005
         (665 letters)



>mm_chr12_107496641_107497704
          Length = 1064

 Score = 1195 bits (618), Expect = 0.0
 Identities = 651/662 (98%), Gaps = 2/662 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcattagcgttatctttgtttagggtataaaatctacacattaaatggctggagtg 64
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 204 gaattcattagtgttatctttgtttagggtataaaatctacacattaaatggccggagtg 263

                                                                       
Query: 65  gagcgttgatttttctctggtctaaacaaacctcaagtggctggaaaggaagtggg-ctg 123
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 264 gagcgttgatttttctctggtctaaacaaacctcaagtggctggaaaggaagtggggctg 323

                                                                       
Query: 124 gatgggagtcgacctgggtcagggggaatggtttaggaaggactgattcaagacttagaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gatgggagtcgacctgggtcagggggaatggtttaggaaggactgattcaagacttagaa 383

                                                                       
Query: 184 gttgccctttctgtgttttctctgaggacaggttggtagttagccgggcatcaggtgagt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gttgccctttctgtgttttctctgaggacaggttggtagttagccgggcatcaggtgagt 443

                                                                       
Query: 244 actctggaatgggaatgggaagctggtagagaatgggtaccacctcacgtaaccattgaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 actctggaatgggaatgggaagctggtagagaatgggtaccacctcacgtaaccattgaa 503

                                                                       
Query: 304 gcaagagccacacttctgagtcattgcatctcttgtctggagatgagggaattcaggaca 363
           ||||||||||||||||||||||||| ||||||| |||||| ||||||| ||||||| |||
Sbjct: 504 gcaagagccacacttctgagtcattacatctctcgtctggtgatgaggaaattcagaaca 563

                                                                       
Query: 364 gagagatcgggccacttgcctgaggtgacaagaacactgaatcagggaccaccaagtctg 423
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 564 gagagatcgggccacttgcctgaggtgataagaacactgaatcagggaccaccaagtctg 623

                                                                       
Query: 424 gctttcttgggagccttgcaccttgtcaagatctataggatgtgttgtgagctgagcaca 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gctttcttgggagccttgcaccttgtcaagatctataggatgtgttgtgagctgagcaca 683

                                                                       
Query: 484 ggcagcccttgggggntggtgggtgttgctctcattgagacggccatcagcaccagaaac 543
           ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 684 ggcagcccttggggg-tggtgggtgttgctctcactgagacggccatcagcaccagaaac 742

                                                                       
Query: 544 gttgagtaagatgttgaaatgcaacagctcacactgagaggcttgaaggatgcacatgcg 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gttgagtaagatgttgaaatgcaacagctcacactgagaggcttgaaggatgcacatgcg 802

                                                                       
Query: 604 ttcattctcacatggctctggatgctatgagtctgacatcaagggtcaggcagctctgac 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ttcattctcacatggctctggatgctatgagtctgacatcaagggtcaggcagctctgac 862

             
Query: 664 tc 665
           ||
Sbjct: 863 tc 864


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1064
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1054
Effective search space:   690370
Effective search space used:   690370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)