TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCTATCTTTGAGAGCAGGGATGTCTCTGTCTCTTGTCTGCTCTGGAGAC
CATGGTTCTCTACTCAGTTACATAGTCCGGGCTTGATACGAGGATTTGTT
CCATCTTCGTATGCCATATACAATTGCTATTCCTGACAGACCTGTTCTTT
TCTGAAGAGAAACAGAGGAGCAGTGGTTTGGAAGTAGAGGCAAGTTGTGG
TCACAGGGTGGTGACTGGGAAGACAGGAGGTAGATGAGGCTTTCCTCAGG
ATGTATTGTATGAGAGAGTTAAAACAAACAAACAAACAGAAAACATGGAA
GGTTGAAAAAAAGACATGCCCCAAACCACAGCACTTGGTAAGAGACAAGA
ATGAGAACACAGAGAATCTAGCTCCCATATCAAATTCTGCAACTATCCAG
AAAAGACGTGACTGGGGAACAGAAGGGTAAATTTGATCACTTTTACTTTT
TAAATTAGTGGTTTATTCACAGACTTTACATATCTTTGCTTACAAATCTG
ATATGTTAAATCCAATTTGAAATCATTTAATATTTCTTTAATAATAGTTA
CATCCAATCAAATATAATACAACTCACCTGTATATAGATTCTTCCTTAGC
ACAGTTTTTTATGTCATGATACCAAAGCATGTAGTGATTATCTTCCATGG
TTTTCAGCTTTTATCTTTTAAGTTGACATACATTTGCACACATTTGT

ATGAATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCAAATGGCTGAGAAGCACCTAAAGAAA
TGTTCAACATCCTTAATCATCAAGGAAATGCAAATCTAAACGACCCTGAG
ATTCCACCTCACACCAGTAAGAATGGCTAAGATCAAAAACTCATGTGACA
TCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCGGG
TGGGACTGCAAGCTGATACAACCACTCTGGAAATCAGTTTGGCAGTTTTT
CAGAAAATTGGACATAGTGCTACCAGAAGATCCAGCAATACCACTCTAGG
GCATATACCCAGAAGATGCTCCAACATGAAATAAGGACACATGTTCCACT
ATGTTTTTAACAGCCTTATATATAATAATAGGCAGAAGCTGGAAAGAACC
CAGATGTCCCTCAACAAAAATGGATACATAAAATATGGTACATTTACACA
ATGGAGTACTACTCAGCTATTATAAATAATGAATTAATGAAATTCTTAGA
CAAATGGATAGATCTGGAGGATATCATCTTGTGTGATTGTCTTAGTCAGG
GTTTCTATTCCTTCACAAACATCATGACCAAAAAGCAAGTTAGGTGAGGA
AAAGGGTTTATTCAGCTTACAATTCCATACTGCTGTTTATCACCAAGGAA
GTCAGGAGTGGGACTCCAACAGGTCAGATAGCAAGAGCTGATGTA

Query= MSMg01no512_m24.b1 MSMg01no512_m24.b1 CHROMAT_FILE:
MSMg01no512_m24.b1 PHD_FILE: MSMg01no512_m24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:06 2005
         (597 letters)



>mm_chr12_63934433_63935429
          Length = 997

 Score =  959 bits (496), Expect = 0.0
 Identities = 571/598 (95%), Gaps = 4/598 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcctatctttgagagcagggatgtctctgtctcttgtctgctctggagaccatgg 63
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ggaattcctatcaatgagagcagggatgtctctgtctcttgtctgctctggagaccatgg 259

                                                                       
Query: 64  ttctctactcagttacatagtccgggcttgatacgaggatttgttccatcttcgtatgcc 123
           |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 260 ttctctactcagttacatagtccgtgcttgatatgaggatttgttccatcttcgtatgcc 319

                                                                       
Query: 124 atatacaattgctattcctgacagacctgttcttttctgaagagaaacagaggagcagtg 183
           |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 320 atatacaactgatattcctgacagaccttttcttttctgaagagaaacagaggagcagtg 379

                                                                       
Query: 184 gtttggaagtagaggcaagttgtggtcacagggtggtgactgggaagacaggaggtagat 243
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 380 gtttggaagtagaggcaagttgtgatcacagggtggtgactgggaagacaggaggtagat 439

                                                                       
Query: 244 gaggctttcctcaggatgtattgtatgagagagttaaaacaaacaaacaaaca----gaa 299
           |||||||||||||||||||||||||||||||||||||||||||||||||||||    |||
Sbjct: 440 gaggctttcctcaggatgtattgtatgagagagttaaaacaaacaaacaaacaaacagaa 499

                                                                       
Query: 300 aacatggaaggttgaaaaaaagacatgccccaaaccacagcacttggtaagagacaagaa 359
           |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||||||
Sbjct: 500 aacatggaaggttgaaaagaagacatgcccaaaactacagcactaggtaagagacaagaa 559

                                                                       
Query: 360 tgagaacacagagaatctagctcccatatcaaattctgcaactatccagaaaagacgtga 419
           ||  |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 560 tgctaacacagagaatctagctcccacatcaaattctgcaactatccagaaaagacatga 619

                                                                       
Query: 420 ctggggaacagaagggtaaatttgatcacttttactttttaaattagtggtttattcaca 479
           |||||||||||||| ||||||||| |||||||||| ||||||||||||||||||| ||||
Sbjct: 620 ctggggaacagaagcgtaaatttgttcacttttacgttttaaattagtggtttatccaca 679

                                                                       
Query: 480 gactttacatatctttgcttacaaatctgatatgttaaatccaatttgaaatcatttaat 539
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gactttacatatttttgcttacaaatctgatatgttaaatccaatttgaaatcatttaat 739

                                                                     
Query: 540 atttctttaataatagttacatccaatcaaatataatacaactcacctgtatatagat 597
           |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 740 atttctttaataatagttacatccaatcaaatataatacaacccatctgtatatagat 797


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space:   579369
Effective search space used:   579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)