XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAG
GCTTATACCTAAACATGATAAAAGCAATCTACAGCAAACCAGTAGCCAAC
ATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCACTAAAATCAGGGAC
TAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGTACTTGAAG
TATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACAAATT
GGAAAAGAGGAAGTCAAAATATCACTTTTTGCAGATGATATGATAGTATA
TATAAGTGACCCTAAAAATTCTACCAGAGAACTCCTAAACCTGATAAACA
GCTTCGGTGAAGTAGCTGGATATAAAATAAACTCAAACAAGTCAATGGCC
TTTCTCTATACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAACAAC
ACCCTTCTCAATAGTCACAAATAATATAAAATATCTTGGCGTGACTCTAA
CTAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAATCTCTGAAGAAA
GAAATTAAGGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGAT
TGGCAGGATCAACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACA
GATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTG
GAAGGAGCAATTTGCAAATTCATCTGGAATAACAAAAAACCTAGGA

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCATATATAGTAATAATTTTCCTAAATGTTTGTTG
ATTGTTACTAATGAACCTTTTCAAAATAATATAGTTCTGAGAGACTGCAG
AAATTATATGAACAATATATATGTATATATATATGTGTATATATATATAT
TTCTATATTATATTTTAACGTGTGTTTTTTAGGAAGACAGCAAGAATATT
TATCACAACAGAGTTTGTGTGACTGTATCTTCAAACTGTATTTAGTATAC
TCTGCTTTGGAATTGCTTTATTTTGCTTTGGGAACAGAGTTTGTTATTAC
TTCCCTATATTTTCACATACACATTTCACAGAGCACAGTACAACACCATG
TGGCTGGAAAAAAAAAGTACTTTAACATACACATTTCACAGTACACAGTA
CATTGTGTACACTTGTGTGTTGCTATCTGTGCTAAAAACCAGAAGTGTGT
TTCATTTAGTGTTCCCACATACAGTTAGTGTTAAATATCTTAGGTGGTAA
ACATGTGCTTTTTAGGAAGAGAGCAAGAACATGTCTCACCATAGAGTTTG
GGGGGACTACACGGTTTCATTTTACCTTATTTTGGAAAATGGGAGTTTAA
ATTACCCCCCCCGTACCTTTTCCCCCCCCCCCAAAACTCCCCCCCAAAAA
ACCCCTTCCCTGTGGGTCTTTTTTTA

Query= MSMg01no513_a01.g1 MSMg01no513_a01.g1 CHROMAT_FILE:
MSMg01no513_a01.g1 PHD_FILE: MSMg01no513_a01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:21 2005
         (437 letters)



>mm_chr12_94603877_94604713
          Length = 837

 Score =  770 bits (398), Expect = 0.0
 Identities = 424/436 (97%), Gaps = 8/436 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   atatatagtaataattttcctaaatgtttgttgattgttactaatgaaccttttcaaaat 61
           ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 202 atatatagtaataattttcttaaatgtttgttgattgttactaattaaccttttcaaaat 261

                                                                       
Query: 62  aatatagttctgagagactgcagaaattatatgaacaatatata--tgtatatatatatg 119
           ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| 
Sbjct: 262 aatatagttctgagagactgcagaaattatatgaacaatatatacgtgtatatatatat- 320

                                                                       
Query: 120 tgtatata--tatatatttctatattatattttaacgtgtgttttttaggaagacagcaa 177
              |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ---atatacatatatatttctatattatattttaacgtgtgttttttaggaagacagcaa 377

                                                                       
Query: 178 gaatatttatcacaacagagtttgtgtgactgtatcttcaaactgtatttagtatactct 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gaatatttatcacaacagagtttgtgtgactgtatcttcaaactgtatttagtatactct 437

                                                                       
Query: 238 gctttggaattgctttattttgctttgggaacagagtttgttattacttccctatatttt 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gctttggaattgctttattttgctttgggaacagagtttgttattacttccctatatttt 497

                                                                       
Query: 298 cacatacacatttcacagagcacagtacaacaccatgtggctggaaaaaaaaagtacttt 357
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 498 cacatacacatttcacagagcacagtacaacaccatgtggctgggaaaaaaaagtacttt 557

                                                                       
Query: 358 aacatacacatttcacagtacacagtacattgtgtacacttgtgtgttgctatctgtgct 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aacatacacatttcacagtacacagtacattgtgtacacttgtgtgttgctatctgtgct 617

                           
Query: 418 aaaaaccagaagtgtg 433
           || |||||||||||||
Sbjct: 618 aacaaccagaagtgtg 633


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space:   354384
Effective search space used:   354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)