TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAATAACAACCTTCTTTGGTATGTTAACATACAAGAACAACTCACAT
GATATGTACTCACTGATAAGTGAGTATTAGCCCAGAAACTTAGAATACCC
AAGATACAAGATACAAAGCACATGAAACTCAAGAAGAATGAAGACCAAAG
TGCACTTTGCCCCTTCTTAGAACTGGGAACAAAACACCCACGGAAAGAGT
TACAGAGACAAAGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGAC
TATGATATCCAGGAATCCATCCCATAATCAGCTGCCAAACGCAGACACCA
TTGCATACACTAGCAAGGTTTTGCTGAAAGGACCCAGATGTAGCTGTCTC
TTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGT
CAGCTATTGGATGGATCACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTA
TCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGAAACAGCAATATGA
ACCAACCAGTACCCCCTAGATCTCGTGTCTCTAGCTGCATATGTATCAGA
AGATGGCCTAGCCGGCCATCAGTGGAGAGGCCCATTGATCATCGTGCAAA
CTTTATATGCCTTAGTACAGGGGAATGCCAGGGCCAAAAAGTGGGAGTGG
GTGGGTAGGGAAAATAAGGGTGGAGTTTTNTTTTTTNTTTTTTGTTNTNN
TTTTTTTTTTTTTTGTTGTTTTTATTGTGTTTG

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACCTCCTCAATCTCCACCCAAAATGC
CAAGTTACAAAAATATCTGCAGGTAGGTATATACATGGAATAGCTTATAT
AATTAATTAAACTTAATCATAAAAGCAGACACACAGAGGAATTCTCAAGA
AAGAATGATTTGTGTTAATGTCTATGGACATTACTATAACTAGATACAAT
CAAAAAGTGGCAATTTTGGAACTTTTTTCTAATGGCTTCTCACAGAATTT
ATTTGGAGATTGCCTGGTTTTGATTCATATTCTGTTTCAAGACGTGTCCC
GATTTTATCACTGTCCTAACAGTTTCCTGAATCCCATAATTATTCTTCTA
ACCTGGAGACTTTTTTCAAGTAAATGTTTGTATGTTATGATTCTTAATAA
ATTGCTAAACAGCCGTGTGTTAAAAATTGTCAGCTCAAATTTTTCATATA
ATGATGCACTGTATATCATACATGTAAATATGTGGTGAACTTGTTTTTAG
ACTGTTTCAGCAATGATTTTGTTATACTCAAATTCATATTATAGTGAATA
TTGACAGCCATATTCAAAATGGGCTTTTGATTAAATATATTAGGTACAAA
ACAAAAGACAATGTATAACATATAGTTTTGTACCCGATATAAATATATTT
ATTCAGATAGTTAAAATATTTTTATATTAGCTCCTCTGGGAAAATAATTT
GATATATTTCAAAGCAATAATTTCCTATACAGTTAC

Query= MSMg01no515_g05.g1 MSMg01no515_g05.g1 CHROMAT_FILE:
MSMg01no515_g05.g1 PHD_FILE: MSMg01no515_g05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:41 2005
         (648 letters)



>mm_chr12_95811301_95812351
          Length = 1051

 Score = 1135 bits (587), Expect = 0.0
 Identities = 633/649 (97%), Gaps = 3/649 (0%)
 Strand = Plus / Minus

                                                                       
Query: 3   ctcctcaatctccacccaaaatgccaagttacaaaaatatctgcaggtaggtatatacat 62
           |||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 851 ctcctcaatcaccacccaaaatgccaagttacaaaaatatcagcagataggtatatacat 792

                                                                       
Query: 63  ggaatagcttatataattaattaaacttaatcataaaagcagacacacagaggaattctc 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 ggaatagcttatataattaattaaacttaatcataaaagcagacacacagaggaattctc 732

                                                                       
Query: 123 aagaaagaatgatttgtgttaatgtctatggacattactataactagatacaatcaaaaa 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 aagaaagaatgatttgtgttaatgtctatggacattactataactagatacaatcaaaaa 672

                                                                       
Query: 183 gtggcaattttggaacttttttctaatggcttctcacagaatttatttggagattgcctg 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gtggcaattttggaacttttttctaatggcttctcacagaatttatttggagattgcctg 612

                                                                       
Query: 243 gttttgattcatattctgtttcaagacgtgtcccgattttatcactgtcctaacagtttc 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 611 gttttgattcatattctgtttcaagacgtgtcccgattttatcactgtcctaacagtttt 552

                                                                       
Query: 303 ctgaatcccataattattcttctaacctggagacttttttcaagtaaatgtttgtatgtt 362
           |||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||
Sbjct: 551 ctgaatcccataattattcagctaacctggagatttttttcaagtaaatgtttgtatgtt 492

                                                                       
Query: 363 atgattcttaataaattgctaa--acagccgtgtgttaaaaattgtcagctcaaattttt 420
           |||||||||||||||| | ||   ||||||||||||||||||||||||||||||||||||
Sbjct: 491 atgattcttaataaatcgatatttacagccgtgtgttaaaaattgtcagctcaaattttt 432

                                                                       
Query: 421 catataatgatgcactgtatatcatacatgtaaatatgtggtgaacttgtttttagactg 480
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 431 catataatgatgcactgtatatcatacatgtaaatatgtggtgaatttgtttttagactg 372

                                                                       
Query: 481 tttcagcaatgattttgttatactcaaattcatattatagtgaatattgacagccatatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tttcagcaatgattttgttatactcaaattcatattatagtgaatattgacagccatatt 312

                                                                       
Query: 541 caaaatgggcttttgatt-aaatatattaggtacaaaacaaaagacaatgtataacatat 599
           |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 311 caaaatgggcttttgatttaaatatattaggtacaacacaaaagacaatgtataacatat 252

                                                            
Query: 600 agttttgtacccgatataaatatatttattcagatagttaaaatatttt 648
           |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 251 agttttgtacccaatataaatatatttattcagatagttaaaatatttt 203


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1051
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1041
Effective search space:   664158
Effective search space used:   664158
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)