Query= MSMg01no516_d09.b1 MSMg01no516_d09.b1 CHROMAT_FILE:
MSMg01no516_d09.b1 PHD_FILE: MSMg01no516_d09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:51 2005
(607 letters)
>mm_chr12_90373650_90374656
Length = 1007
Score = 1166 bits (603), Expect = 0.0
Identities = 606/607 (99%)
Strand = Plus / Plus
Query: 1 aataatagatgataaagatgaggagctagatagcatgccctgtagcattgaaagtcttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aataatagatgataaagatgaggagctagatagcatgccctgtagcattgaaagtcttaa 260
Query: 61 agtccaggaagtagggacaagagtcaatttaatatatcagcaccctactcttcatgataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtccaggaagtagggacaagagtcaatttaatatatcagcaccctactcttcatgataa 320
Query: 121 aaactccaacttacccaataggatgtctcttttcttacttaccccttcaacagtttaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaactccaacttacccaataggatgtctcttttcttacttaccccttcaacagtttaacc 380
Query: 181 agtggaaaggaaaatggaaatatgacatttcatcacgttggaaaaggattcttctttgaa 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 agtggaaaggaaaatggaaatatgacatttcatcactttggaaaaggattcttctttgaa 440
Query: 241 aacatggaaactttctgtctatggacattagggatgtgtcttctcctggcaaagctactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacatggaaactttctgtctatggacattagggatgtgtcttctcctggcaaagctactg 500
Query: 301 agggcttaaatgattttcttttatagcacactacatttcctcacctgaaaatgaggagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agggcttaaatgattttcttttatagcacactacatttcctcacctgaaaatgaggagct 560
Query: 361 tgaattacctttcttgctttgtaatagaaatgtcatcttacttctcagcatatagctcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgaattacctttcttgctttgtaatagaaatgtcatcttacttctcagcatatagctcta 620
Query: 421 ataatctggggccttccaatggcacttcgcctaggagtgagcattgcatagatattctcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataatctggggccttccaatggcacttcgcctaggagtgagcattgcatagatattctcc 680
Query: 481 agaacccgaatccatgctctgcatctgcacatttcctgattcccaggctttgtgaccatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaacccgaatccatgctctgcatctgcacatttcctgattcccaggctttgtgaccatc 740
Query: 541 actgattcctcttcatttttatccctagccaggccccgttctgacctctgatgccgccca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 actgattcctcttcatttttatccctagccaggccccgttctgacctctgatgccgccca 800
Query: 601 tctccat 607
|||||||
Sbjct: 801 tctccat 807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_d09.g1 MSMg01no516_d09.g1 CHROMAT_FILE:
MSMg01no516_d09.g1 PHD_FILE: MSMg01no516_d09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:51 2005
(543 letters)
>mm_chr12_90511067_90512008
Length = 942
Score = 1027 bits (531), Expect = 0.0
Identities = 540/543 (99%), Gaps = 1/543 (0%)
Strand = Plus / Minus
Query: 1 aactaaaaaaagtcagagccgttatctttcttttacaacattgctgatggagataaagaa 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 aact-aaaaaagtcagagccgttatctttcttttacaacattgctgatggagataaagaa 684
Query: 61 tgtgccagccttagctggtgccagtatgtggccatggagcaactacaagaaaataatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tgtgccagccttagctggtgccagtatgtggccatggagcaactacaagaaaataatatt 624
Query: 121 caaataccagcaggccacagcaggaagtttcagacaaggggcctgtggagaagattaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 caaataccagcaggccacagcaggaagtttcagacaaggggcctgtggagaagattaaaa 564
Query: 181 tctgaaaggcagaggacttactttccctgggggaacaaagaaggggtgggggcatgctaa 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 563 tctgaaaggcagaggacttactttccctgggggaacaaagaatgggtgggggcatgctaa 504
Query: 241 tcctccagtttcataaggtttctgatttactagcctcttagaaagctctgttggggattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tcctccagtttcataaggtttctgatttactagcctcttagaaagctctgttggggattg 444
Query: 301 tcattttgatgggaaggccttgctgtaaaggttaaacatgctaagaagcatgaaatgatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcattttgatgggaaggccttgctgtaaaggttaaacatgctaagaagcatgaaatgatc 384
Query: 361 ttctccaagaaagatggcatctccttgccaaggaaatagctgtccaacagcccacagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttctccaagaaagatggcatctccttgccaaggaaatagctgtccaacagcccacagaag 324
Query: 421 ggggtctttcaagagtcattcatacccaggattttcaactctgactcccacatgcatttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggggtctttcaagagtcattcatacccaggattttcaactctgactcccacatgcatttg 264
Query: 481 ttactccaaaatactctctgctggactgcgtttatcatttgtggagtgcaaaaggatagg 540
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 263 ttactccaaaatactctctgctggactgtgtttatcatttgtggagtgcaaaaggatagg 204
Query: 541 aga 543
|||
Sbjct: 203 aga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 942
Length adjustment: 10
Effective length of query: 533
Effective length of database: 932
Effective search space: 496756
Effective search space used: 496756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
