TTACTTCACCCCCCCCTCTCTGTCTCCTCTCTCCTCTCACTTCTTCTTTC
CCGCTTTCATCCCTCCTCAATTTACATTACATCCACGCTGGTCTTACTGC
CACCACCTCTCCCTATCCCGCCTAGAAAGGTATCCCTGCGCGCTAATACT
TTTCACCGCTTACCCTCATCCCTGCGGCACCGTGATTATATATAAATCAC
AACGCCTGTCCCCTCAATTACGTTTGGAAAATGCAAAATTAAATTTATTC
TTGCGCCCCCCCTCCACAGGGGCTAAAACATGGGAATTTTTTAATGCGGC
TACATGGTGCCTCACGCTTTATTCCCCCGGCTCGTCCCTTTTATCTCGGT
GTTCTTATNCAAAAAGCGCTTTCCAGGGGCGCTCCCCCTTTTTTTCCCCT
TACACGGTCCCTCCCTTGGGGGTAATCCCCCCCCCCTTTTTTTCCATTGG
GAAAAAAAACAAAATTTTCTTTTTTCTTTATTCTCCCCCCCTCTCTTATC
CCCCTTATTTTTCCTCCCCCCCCCTCACCTTCACCCATTGTCTTTTATTT
CTGCCTGTTCCCTTGTGTTTTATACTATATATACTCCTCTCTATAACAAA
ACACCTAAATAAGAACTATCCCCATACTTGTGCCCCCTAGCGCCCCGCCA
TCATTTTTTTTTGGTGCACCTATACCACCAACAATATATTTGGCGTTCTC
CCTTAATAATACATCCCTCATAAACCCTTTTCCTCCTCTTATCATCACCG
TATGTGAGATTACATTCCTCCCTGTCACACAAAGAAATTTCACCCCCCTC
TCCACCTCGTCTCCCCTCCACCTACTCGCATTATATAATACTTCCCTCCG
TCGTGACGCTTTACCACTACACAATCAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXTGTGTAGGCCCTAAGAAAAAATATATAAACAGATATTGAG
GGATGAAAAATTAGCTCACATGATAAAAGTGTTGTTTTTTTTTTTCCACA
AGCATGAAACTCTCAGTGCCATCCTTGGGATCAATTTAATTTTTTGAAAA
GATAATCAACTTCACAGGGTTGTCTGTGACCTCAACATGAGTGCTATACG
ACCTAAGCTCCATCACCTGAAACACACAGACACAAATATTAAAAATAACA
ACAATGATGACAATAAATGATAACTGATAATGACATGATGATGAAGAAGG
AGAAGGAGGAGGAGGAGAAGAACAAGAGGAAGAAGAAAAAGAGGGTACAT
GAAAAGGAATGAGTTTCAGGGACAAAAACATTTCAATAATAAATTAATTT
CAAGAATTGGATTAAGAATATGCTAATAGAGAAACTATGGAGTCACGAAG
AGGCCCTACAATAGTATTAAAATAATGGCAGAAGTCCTTTCTTATGACTC
TTGATTTCAAATGTAAATTGACCAAACTCCTCAACTAAAAGGCAAAGACC
AGATGAACCGTCAAGGTAACCTGTCCAATGGTATAATGTTTAAGACCCAT
ATTACACCTGCAGACATAACTACTTAGAAAGTGAAAGAATGAAATAAGTG
TTTTAAGATATTGGTAAGTGAAGTTAAATTGGGGTATCTTTATTAACATT
AGACAACATGGATTTTAATAAAA

Query= MSMg01no517_e20.g1 MSMg01no517_e20.g1 CHROMAT_FILE:
MSMg01no517_e20.g1 PHD_FILE: MSMg01no517_e20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:20 2005
         (618 letters)



>mm_chr12_44525686_44526703
          Length = 1018

 Score = 1152 bits (596), Expect = 0.0
 Identities = 614/622 (98%), Gaps = 4/622 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtgtaggccctaagaaaaaatatataaacagatattgagggatgaaaaattagctcaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tgtgtaggccctaagaaaaaatatataaacagatattgagggatgaaaaattagctcaca 256

                                                                       
Query: 61  tgataaaagtgttgttttttttttt----ccacaagcatgaaactctcagtgccatcctt 116
           |||||||||||||||||||||||||    |||||||||||||||||||||||||||||||
Sbjct: 257 tgataaaagtgttgtttttttttttttttccacaagcatgaaactctcagtgccatcctt 316

                                                                       
Query: 117 gggatcaatttaattttttgaaaagataatcaacttcacagggttgtctgtgacctcaac 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gggatcaatttaattttttgaaaagataatcaacttcacagggttgtctgtgacctcaac 376

                                                                       
Query: 177 atgagtgctatacgacctaagctccatcacctgaaacacacagacacaaatattaaaaat 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atgagtgctatacgacctaagctccatcacctgaaacacacagacacaaatattaaaaat 436

                                                                       
Query: 237 aacaacaatgatgacaataaatgataactgataatgacatgatgatgaagaaggagaagg 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aacaacaatgatgacaataaatgataactgataatgacatgatgatgaagaaggagaagg 496

                                                                       
Query: 297 aggaggaggagaagaacaagaggaagaagaaaaagagggtacatgaaaaggaatgagttt 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aggaggaggagaagaacaagaggaagaagaaaaagagggtacatgaaaaggaatgagttt 556

                                                                       
Query: 357 cagggacaaaaacatttcaataataaattaatttcaagaattggattaagaatatgctaa 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cagggacaaaaacatttcaataataaattaatttcaagaattggattaagaatatgctaa 616

                                                                       
Query: 417 tagagaaactatggagtcacgaagaggccctacaatagtattaaaataatggcagaagtc 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tagagaaactatggagtcacgaagaggccctacaatagtattaaaataatggcagaagtc 676

                                                                       
Query: 477 ctttcttatgactcttgatttcaaatgtaaattgaccaaactcctcaactaaaaggcaaa 536
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ctttctcatgactcttgatttcaaatgtaaattgaccaaactcctcaactaaaaggcaaa 736

                                                                       
Query: 537 gaccagatgaaccgtcaaggtaacctgtccaatggtataatgtttaagacccatattaca 596
           |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 737 gaccagatgaactgtcaaggtaacctgcccaatggtataaagtttaagacccatattaca 796

                                 
Query: 597 cctgcagacataactacttaga 618
           ||||||||||||||||||||||
Sbjct: 797 cctgcagacataactacttaga 818


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space:   612864
Effective search space used:   612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)