XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAAA
GGTTAGAAAGAAAGAAAACCATTTATTTCTTTTCCTCTTAGAAGGCCAAA
GCACAGATGCGCCTTCATCCCATAGCTCATCTGTCCCAAGAAGAGACACT
TCAGAGCTGTGACAGGTGCGTGTGTGGCGTGAGCAAAGGACCCAGAAAAA
CTAAGATGGAAATACAGTGAGTGCTGCAGACAATGGTGGCCTGAGTGGAT
GGGCCGATGGCAGGCAGAGGACAGGGCAAATCACCATGACTCCTTCCCCA
GCCTCCTCCCAGCCTCGGGGTGCAGGAGGAATCGCCCTGTGCCTGCCTCA
CTTTCTCGCCCTCCTAAGACTGACCACAACCTCCTGTGTGCTGCCCCCTT
GTTCTTGCTGTCTCAAATCCACTGCATGGCTGGCCAAAGCAGAGAGCACA
GAGCCCTGCCGGGAGCCTGGGTGATTACCCAAGTCTAACCATGACTTCAT
CATGCAAAACTCTCTTTGCACAAACACAAGCTCAGGACCTAAGAGACACC
AAAGCACACAACCGAGAACCCAAGCAGACCTTCAGGGCTGCCTTCAGTGT
GAGACAGGCTCCTTCAGTATCCACTCACGGGACATCGGAGGGGTTACCTC
ATGTCCACTGAGGGATACGACGGACCTTTTATCAAACTTCTCTGAATAGC
CGTAGACTTTTTTCTAGGGTGAAGAAGAAGGGCTGGCCACTATGGTACCA
ACAATCTTTTTCTGGACTGGTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAA
ATGCTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGA
GATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGAC
AGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTG
GTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCC
TCAGAAAACTGGATATAGTACTACCGGAGGATCCAGCAATACCTCTCCTG
GGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCAC
TATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAGGAACCCA
GATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACA
ATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGC
CAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCAC
AAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAAA
ACCTAAGATACCCAAGATATAAGATACAATTTCCCTAACACATGAAACTC
ATGAAAAATGAAGACTGAAGTGTGGACACTATGTCCCCTCCTTAGAAGTG
GGAAGCAAACACCCTTGGAATGAGGTACAGATTTCAAGTTTGGA

Query= MSMg01no517_j24.b1 MSMg01no517_j24.b1 CHROMAT_FILE:
MSMg01no517_j24.b1 PHD_FILE: MSMg01no517_j24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:46 2005
         (560 letters)



>mm_chr12_71183004_71183963
          Length = 960

 Score = 1060 bits (548), Expect = 0.0
 Identities = 554/556 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaaaaggttagaaagaaagaaaaccatttatttcttttcctcttagaaggccaaa 64
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaaaggtaagaaagaaagaaaaccatttatttcttttcctcttagaaggccaaa 264

                                                                       
Query: 65  gcacagatgcgccttcatcccatagctcatctgtcccaagaagagacacttcagagctgt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcacagatgcgccttcatcccatagctcatctgtcccaagaagagacacttcagagctgt 324

                                                                       
Query: 125 gacaggtgcgtgtgtggcgtgagcaaaggacccagaaaaactaagatggaaatacagtga 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gacaggtgcgtgtgtggcgtgagcaaaggacccagaaaaactaagatggaaatacagtga 384

                                                                       
Query: 185 gtgctgcagacaatggtggcctgagtggatgggccgatggcaggcagaggacagggcaaa 244
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 385 gtgctgcagacaatggtggcctgagtggatggaccgatggcaggcagaggacagggcaaa 444

                                                                       
Query: 245 tcaccatgactccttccccagcctcctcccagcctcggggtgcaggaggaatcgccctgt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcaccatgactccttccccagcctcctcccagcctcggggtgcaggaggaatcgccctgt 504

                                                                       
Query: 305 gcctgcctcactttctcgccctcctaagactgaccacaacctcctgtgtgctgccccctt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcctgcctcactttctcgccctcctaagactgaccacaacctcctgtgtgctgccccctt 564

                                                                       
Query: 365 gttcttgctgtctcaaatccactgcatggctggccaaagcagagagcacagagccctgcc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gttcttgctgtctcaaatccactgcatggctggccaaagcagagagcacagagccctgcc 624

                                                                       
Query: 425 gggagcctgggtgattacccaagtctaaccatgacttcatcatgcaaaactctctttgca 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gggagcctgggtgattacccaagtctaaccatgacttcatcatgcaaaactctctttgca 684

                                                                       
Query: 485 caaacacaagctcaggacctaagagacaccaaagcacacaaccgagaacccaagcagacc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 caaacacaagctcaggacctaagagacaccaaagcacacaaccgagaacccaagcagacc 744

                           
Query: 545 ttcagggctgccttca 560
           ||||||||||||||||
Sbjct: 745 ttcagggctgccttca 760


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space:   522500
Effective search space used:   522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)