Query= MSMg01no518_a14.b1 MSMg01no518_a14.b1 CHROMAT_FILE:
MSMg01no518_a14.b1 PHD_FILE: MSMg01no518_a14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:19 2005
(703 letters)
>mm_chr12_110551719_110552821
Length = 1103
Score = 1290 bits (667), Expect = 0.0
Identities = 691/699 (98%), Gaps = 1/699 (0%)
Strand = Plus / Plus
Query: 5 gaattcttgttcctgtcctaactcttaatattttaatcaattcttttgtaatatttattc 64
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgttcctgtcctaactcttgatattttaatcaattcttttgtaatatttattc 264
Query: 65 tttcctgagctcttgcaattgtgaatatcttttgttccattctttattctcttgaaatat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttcctgagctcttgcaattgtgaatatcttttgttccattctttattctcttgaaatat 324
Query: 125 attctgcaatgctggtttaacagtgatgagtttctttagtttacatttacatttagttac 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 attctgcaatgctggtttaacagtgataagtttctttagtttacatttacatttagttac 384
Query: 185 atttatggaaaaaaagtctttatttttccattaattttaaaggatagctgccagatacag 244
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atttatggaaaaaa-gtctttatttttccattaattttaaaggatagctgccagatacag 443
Query: 245 tgatcttggttgggagatattttgttttcctggcttggaaaacattggcccatattatcc 304
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 444 tgatcttggttgggagatattttgttttcctagcttggaaaacattggcccatattatcc 503
Query: 305 tagcttttagcatttgcagtctggtcttattctagtaggtttggctttgtgaataacact 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tagcttttagcatttgcagtctggtcttattctagtaggtttggctttgtgaataacact 563
Query: 365 tctttcttgaagattccagtgttcttttttaattcttgccctttgcacacagtattatgc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tctttcttgaagattccagtgttcttttttaattcttgccctttgcacacagtattatgc 623
Query: 425 agagaagttcttttctggctatgtctcctgtatgtggatatccattttatgtttgctctt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agagaagttcttttctggctatgtctcctgtatgtggatatccattttatgtttgctctt 683
Query: 485 tttcctttattgcattctgaatgaaataattcctaccaacattgtctttaatttccacta 544
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 684 tttcctttattgcattctgaatgaaataattcctaccaatattgtctttaatttccagta 743
Query: 545 ttctttcttctacctggtctagtctattggtgatacttcccattgaatttttatttggtt 604
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 744 ttctttcttctacctggtctagtctattggtgatacttcccactgaatttttatttggtt 803
Query: 605 tattgaccattttgtttccaaaacttgaatttatgttttagaatctctatttactgactt 664
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tattgaccattttatttccaaaacttgaatttatgttttagaatctctatttactgactt 863
Query: 665 tttcacccaagtattgaagtgacacacattatctcatta 703
|||||||||||||||||||||||||||||||||||||||
Sbjct: 864 tttcacccaagtattgaagtgacacacattatctcatta 902
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 703
Length of database: 1103
Length adjustment: 10
Effective length of query: 693
Effective length of database: 1093
Effective search space: 757449
Effective search space used: 757449
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no518_a14.g1 MSMg01no518_a14.g1 CHROMAT_FILE:
MSMg01no518_a14.g1 PHD_FILE: MSMg01no518_a14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:20 2005
(306 letters)
>mm_chr12_110740102_110740807
Length = 706
Score = 501 bits (259), Expect = e-146
Identities = 265/267 (99%), Gaps = 1/267 (0%)
Strand = Plus / Minus
Query: 1 tgaagaggaaatcaggcagagtaaaactcccacaggcttactggccacccagccagagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tgaagaggaaatcaggcagagtaaaactcccacaggcttactggccacccagccagagga 392
Query: 61 cagtccattgccttcatcttctgtagtagtggctgcctgtgcattatgggatattatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cagtccattgccttcatcttctgtagtagtggctgcctgtgcattatgggatattatcaa 332
Query: 121 atgatggcagtgcgctagtcacccacaggtagaatatgcatgctcatctatccaataaga 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 331 atgatggcagtgcgctagtcacccacaggtagaatatgcatgcccatctatccaataaga 272
Query: 181 agtaaaaattaaatgataactttaaattatttcagtgaagaatgcttttgatatgttaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 agtaaaaattaaatgataactttaaattatttcagtgaagaatgcttttgatatgttaaa 212
Query: 241 aaaaactaactngtgtgtgtgtgtgtg 267
||||||||||| |||||||||||||||
Sbjct: 211 aaaaactaact-gtgtgtgtgtgtgtg 186
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 306
Length of database: 706
Length adjustment: 9
Effective length of query: 297
Effective length of database: 697
Effective search space: 207009
Effective search space used: 207009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
