Query= MSMg01no519_p08.b1 MSMg01no519_p08.b1 CHROMAT_FILE:
MSMg01no519_p08.b1 PHD_FILE: MSMg01no519_p08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:50 2005
(671 letters)
>mm_chr12_76984820_76985888
Length = 1069
Score = 1185 bits (613), Expect = 0.0
Identities = 659/683 (96%), Gaps = 15/683 (2%)
Strand = Plus / Minus
Query: 4 ggaattca-agagatctcttgcctcagcctgcctagtgctgagattaaagccgtgtgccg 62
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ggaattcacagagatctcttgcctcagcctgcctagtgctgagattaaagccgtgtgccg 628
Query: 63 ctatacccgcctttaatgccatctatcaggaagggctggagtcaagagcttccagactct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ctatacccgcctttaatgccatctatcaggaagggctggagtcaagagcttccagactct 568
Query: 123 gcagggaagacagtctttttgtcaagctggcaacaactacttgccaaagcccaaatgttc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gcagggaagacagtctttttgtcaagctggcaacaactacttgccaaagcccaaatgttc 508
Query: 183 tgtcatggaacttgattcccgttaggaatgcgatgtctcagaagtaagtaggtttgaggg 242
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 507 tgtcatggaacttgattcccgttaggaatgtgatgtctcagaagtaagtaggtttgaggg 448
Query: 243 ctttgctcttgggattattgctttaatgctatcatagattcatgagtttatcataaagga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ctttgctcttgggattattgctttaatgctatcatagattcatgagtttatcataaagga 388
Query: 303 atgagctacgactgcgtttctttcgcttccctctctccatccctttaccaatccaccggg 362
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 387 atgagctacgactgcgtttctttcacttccctctctccatccctttaccaatccaccagg 328
Query: 363 aagtgacagagcagagaggccattgtcag--------------gtgtgtgtttgcgattg 408
||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 327 aagtgacagagcagagaggccattgtcagatgtcttctcgattgtgtgtgtttgcgattg 268
Query: 409 tgtgtgttttgttggatggaaccattgaatctaagtgaatgcagtcggacacaggctgta 468
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 267 tgtgtgttttgttggatggaaccattgaatctaagtgaatgcagtcggacatgggctgtg 208
Query: 469 tggggtgttgaagagaatacactcagagctctgtctctgtggaattgacaatgctaagct 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tggggtgttgaagagaatacactcagagctctgtctctgtggaattgacaatgctaagct 148
Query: 529 gcctcccagcattcccagagtgtaggcacctttaggaaaagagattggccaggatgccag 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gcctcccagcattcccagagtgtaggcacctttaggaaaagagattggccaggatgccag 88
Query: 589 caaagttctgtttgtgtcccaaacgatgatagcacaggtatgcttaatttatggaaattc 648
||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 87 caaagttctgtttgtgttccagacggtgatagcacaggtatgcttaatttatggaaattc 28
Query: 649 actacactttacttatgaatttg 671
|||||||||||||||||||||||
Sbjct: 27 actacactttacttatgaatttg 5
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1069
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1059
Effective search space: 699999
Effective search space used: 699999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_p08.g1 MSMg01no519_p08.g1 CHROMAT_FILE:
MSMg01no519_p08.g1 PHD_FILE: MSMg01no519_p08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:51 2005
(189 letters)
>mm_chr12_76904250_76904840
Length = 591
Score = 234 bits (121), Expect = 2e-66
Identities = 166/191 (86%), Gaps = 18/191 (9%)
Strand = Plus / Plus
Query: 3 gtcccctgcaagagcagcaagcactcataactgctgagccatctttccagcttccaatgt 62
||||||||||||||||||||||||| ||||||| ||||||||| | |
Sbjct: 215 gtcccctgcaagagcagcaagcact--------------catcttttcagcttccatttt 260
Query: 63 tttttttt---aagtcaaaacacaactaaaagaaaaggaagaggggggaatgggtaaacc 119
|||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 261 ttttttttttaaagtcaaaacacaactaaaagaaaaagaagaggggggaacgggtaaacc 320
Query: 120 aaggaaaggagaagga-acggcagaaagaaaagtatttgagtgacttcttggtgtgctct 178
|||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 aaggaaaggagaaggagacgtcagaaagaagagtatttgagtgacttcttggtgtgctct 380
Query: 179 gtaaaattgaa 189
|||||||||||
Sbjct: 381 gtaaaattgaa 391
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 591
Length adjustment: 8
Effective length of query: 181
Effective length of database: 583
Effective search space: 105523
Effective search space used: 105523
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
