Query= MSMg01no520_c22.b1 MSMg01no520_c22.b1 CHROMAT_FILE:
MSMg01no520_c22.b1 PHD_FILE: MSMg01no520_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:09 2005
(621 letters)
>mm_chr12_98446634_98447654
Length = 1021
Score = 1141 bits (590), Expect = 0.0
Identities = 611/618 (98%)
Strand = Plus / Plus
Query: 4 ggaattctcaattagaaatatatacataatgctcaagttgtgtccagctctgaaaatgga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcaattagaaatatatacataatgctcaagttgtgtccagctctgaaaatgga 263
Query: 64 ggaggtagaaaatagaaaatgcatcacatttacataaaacaaacagattttcctccatgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggaggtagaaaatagaaaatgcatcacatttacataaaacaaacagattttcctccatgg 323
Query: 124 gaggcatcgattaaagcccaagtctgcccaactaatttgagctctatgcaaatccaagaa 183
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtggcatcgattaaagcccaagtctgcccaactaatttgagctctatgcaaatccaagaa 383
Query: 184 agccaaatgtcagagacttctggaagtcagtcctggcttctacaacatgaaatttaggtt 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 384 agccaaatgtcagagacttctggaagtcagtcctggcttctacaacatgaaatttaagtt 443
Query: 244 tttatgggaaggtgagggaaataaatcacaccattaatgccaatcatttgtactatccaa 303
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 444 tttaagggaaggtgagggaaataaattacaccattaatgccaatcatttgtactatccaa 503
Query: 304 agcacagaaaattcttaaatccaaaacacattctatccattactgagaatattagcattc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agcacagaaaattcttaaatccaaaacacattctatccattactgagaatattagcattc 563
Query: 364 aagggattcataagattagctgtcactgatctttgctggaaatggacagccttttatttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aagggattcataagattagctgtcactgatctttgctggaaatggacagccttttatttt 623
Query: 424 ttcccctctattttgggcttttcagtttttgagcataatatgtagttaattctgagtgtt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttcccctctattttgggcttttcagtttttgagcataatatgtagttaattctgagtgtt 683
Query: 484 aatcacgaagatgagaactgattcaggccacgcgtgaatctgagcagctctagccttaaa 543
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aatcatgaacatgagaactgattcaggccacgcgtgaatctgagcagctctagccttaaa 743
Query: 544 tctaaggtcattggcaaagtctgttccaggaactacccacagagccagtcagaagaattc 603
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 744 tctaaggtcattggcaaagtctgttccaggaactacccacagagccagccagaagaattc 803
Query: 604 tgtagttgcttttggagc 621
||||||||||||||||||
Sbjct: 804 tgtagttgcttttggagc 821
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no520_c22.g1 MSMg01no520_c22.g1 CHROMAT_FILE:
MSMg01no520_c22.g1 PHD_FILE: MSMg01no520_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:09 2005
(650 letters)
>mm_chr12_98623828_98624876
Length = 1049
Score = 1203 bits (622), Expect = 0.0
Identities = 643/650 (98%), Gaps = 1/650 (0%)
Strand = Plus / Minus
Query: 1 ttatttagaaccgacattgaagtgggggcctatggatggtaaaatggacacttttgtatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 ttatttagaaccgacattgaagtgggggcctatggatggtaaaatggacacttttgtatt 790
Query: 61 gaactctctctaggatggcatttctctgtttagtaatggccaatacaagtgacaaagaac 120
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 789 gaactctctctagcatggcatttctctgtttagtaatgaccaatacaagtgacaaagaac 730
Query: 121 tctgaaaactgttgtgctgattgcagtagctctctgatgctgataaggtagaaaaggcca 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 729 tctgaaaactgttgtgctgattgcagtcgctctctgatgctgataaggtagaaaaggcca 670
Query: 181 ttatccagttgcagcacgatttcccgccagtgatatattagttattgatgttctgtttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ttatccagttgcagcacgatttcccgccagtgatatattagttattgatgttctgtttac 610
Query: 241 agcaataccctggagctgacttgaagcatcatccctgccactgtccattttgtttgggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 agcaataccctggagctgacttgaagcatcatccctgccactgtccattttgtttgggtg 550
Query: 301 ttaaatattttgaatgctatgcttgctagagattaagaaacacctttattattggaatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ttaaatattttgaatgctatgcttgctagagattaagaaacacctttattattggaatta 490
Query: 361 ttaaaaaaaaagtgcacacaaacaaaatcctgttgggagagttcttcaatgttcagcccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ttaaaaaaaaagtgcacacaaacaaaatcctgttgggagagttcttcaatgttcagcccc 430
Query: 421 ttgtttcttttttttttcctccccaaagtaattacttttaatcttgattagttaaaaatg 480
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ttgtttcttttttttt-ccttcccaaagtaattacttttaatcttgattagttaaaaatg 371
Query: 481 cagtttcttagaaatccaataattatcttagagctcattgtaatctctcatgatatcctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cagtttcttagaaatccaataattatcttagagctcattgtaatctctcatgatatcctg 311
Query: 541 agtgattccacatttgttcatttttctttctctgtactgtccattcttgctccccgcatg 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 310 agtgattccacatttgttcatttttctttctctgtactgtccattcttgctccctgcata 251
Query: 601 ttggatattttcttgacatttactttacaagtccaaagttacttttgctg 650
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttggatattttcttgacatttactttacaagtccaaagttacttttgctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1049
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1039
Effective search space: 664960
Effective search space used: 664960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
