GGGGGGGGAGAGTCGGGCTCTTTGCTCGCGCCCCGCCTCCGCCCCAGCCT
TTCTCCCCCTCGGGGGCGGGGGGGTAGGTGGTGGCGGCCGTTCGTGGGGG
ATGTACGCACTTGTGTGTGGCCTTATTCGGCGCTTGGCGCAGGGCAGCTA
TGGACNCTCCTGAGGGGGAGGCCAAATGGGCCCCGAGCACCACAAGTCAG
ATCGAATCCAGAATAGCTGTAAGGGTAATNGATCACTCTTACNGCACAAA
CTTGCCCATCTAAATAACCCCGAAAANTTATGTATCGTAN

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGTTCCTTGACTTCGCTGAT
TCCTTCATCTGGGACACAGAGCATGTGAGGCCTCCCTCAGGAGCTGCCCC
AGAGACTAATGACATGGTGTGTGGGAAATGCCTGGTGACCAGAAGGCATC
TCATGCCATATGGCACCCATTCCTCCTTGTGGTAGGTCAGCCTCATTTAC
TGTTTCCTGGTGCCTGGAAGCCAAAGGGAGGCCATGCTTTCCCACGTAGA
TCAGATGACCACTTGAGATAATTATAAGGTTCCTGTTTTGGATGCATTTA
TTAAACAGCCTCTCAACACTTGCCCTCTTGGCTGTGACAGAAGTGAGTCA
CACGAGAGCCAGGAAAGATGGAGAAGACAGGGAGGTCAGTCGTCCCTGGG
GACTAAGAACCACCTGGACACCTCTCCACCTAGATTCCCAGGCAGAACAG
ACAGACACTCACTCGTGTGGCAGCCACAAGAGGGTGTGCTTCATCCCCAG
ATCCTGTACCCAAACAAGAGAAAGCAGGAGATAGCTAGAAAGAGATCTGT
CTTATGATGGCTCCCAGGACTGGAGGATACCCCGTGAAATGCTTTGATGG
CACTCCAGTGTCTAGACTCTGCAGCTTGAAGACACAAATTAGAAACTATA
CAGGGTGACCATAGTCAGCAAAGAGGTGTTGAGGACCTAGACTTCCAGAT
GTTTTCTTAAGCTTCATAGT

Query= MSMg01no520_n03.g1 MSMg01no520_n03.g1 CHROMAT_FILE:
MSMg01no520_n03.g1 PHD_FILE: MSMg01no520_n03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:58 2005
         (633 letters)



>mm_chr12_107982246_107983282
          Length = 1037

 Score = 1170 bits (605), Expect = 0.0
 Identities = 628/637 (98%), Gaps = 4/637 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagttccttgacttcgctgattccttcatctgggacacagagcatgtgaggcctccctca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagttccttgacttcgctgattccttcatctgggacacagagcatgtgaggcctccctca 260

                                                                       
Query: 61  ggagctgccccagagactaatgacatggtgtgtgggaaatgcctggtgaccagaaggcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagctgccccagagactaatgacatggtgtgtgggaaatgcctggtgaccagaaggcat 320

                                                                       
Query: 121 ctcatgccatatggcacccattcctccttgtggtaggtcagcctcatttactgtttcctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcatgccatatggcacccattcctccttgtggtaggtcagcctcatttactgtttcctg 380

                                                                       
Query: 181 gtgcctggaagccaaagggaggccatgctttcccacgtagatcagatgaccacttgagat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgcctggaagccaaagggaggccatgctttcccacgtagatcagatgaccacttgagat 440

                                                                       
Query: 241 aattataaggttcctgttttggatgcatttattaaacagcctctcaacacttgccctctt 300
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 aattataaggttcctgttttggatgcatgtattaaacagcctctcaacacttgccctctt 500

                                                                       
Query: 301 ggctgtgacagaagtgagtcacacgagagccaggaaagatggaga--agacagggaggtc 358
           |||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||
Sbjct: 501 ggctgtgacagaagtgagtcacacaagagccaggaaagatggagagaagacagggaggtc 560

                                                                       
Query: 359 agtcgtccctggggactaagaaccacctggacacctctccacctagattcccaggcagaa 418
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 agtcgtccctggggactaagaaccacctggacacctccccacctagattcccaggcagaa 620

                                                                       
Query: 419 cagacagacactcactcgtgtggcagccacaagagggtgtgcttcatccccagatcctgt 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagacagacactcactcgtgtggcagccacaagagggtgtgcttcatccccagatcctgt 680

                                                                       
Query: 479 acccaaacaagagaaagcaggagatagctagaaagagatctgtcttatgatggctcccag 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acccaaacaagagaaagcaggagatagctagaaagagatctgtcttatgatggctcccag 740

                                                                       
Query: 539 gactggaggataccccgtgaaatgctttgatggcac--tccagtgtctagactctgcagc 596
           |||||||||||||||||||||||||||||||||| |  ||||||||||||||||| ||||
Sbjct: 741 gactggaggataccccgtgaaatgctttgatggcgcgctccagtgtctagactctacagc 800

                                                
Query: 597 ttgaagacacaaattagaaactatacagggtgaccat 633
           |||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttgaagacacaaattagaaactatacagggtgaccat 837


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1037
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1027
Effective search space:   639821
Effective search space used:   639821
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)