CCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTCATGCCATTTTCGAAGGATGCTTGACATATAGCCTACAAAATA
ATCTAATTTATCATGTTCCAGGAAGGATCTTAAAGTAATAAATTATCATA
TACAACAATAAGAAATCCACCTACTGGTGATACATAACATTGATTCTTTG
GCTCTGATTTTCAATTTTTTATTTTGTAGAATTTTTAAGATATGTAAGAG
TAAACAGAATATATCACGCTCTGCCAGCCCTCAACCCATGTGAGTTTACA
ACACCACAATCCTAACTACCCCCCACTGTATTATCTTGACACCTATTCCC
GACACCATCTTGTTTTAACCCATGGATATTTTATATCTCTAAAGGATAAG
CAGTCATACTTTCTAAAATAAAATCAAAGTACCCTGGGAAAAAAGAGAAC
ACTTCCCTTCTTATTTAATGCTTAGTCTTCTATTCTAGTCTTCTATTCGT
ATGCTTACTTTCTTTTTATAATAATAAGCAGAACATTGTTAGTTCTTAAT
CAGGGACGGTTTTGACATGCCGGGAGAAATTTGGCAGTAGCAGAATTTTT
CCTTACAGCAGACAGCTACTGGGTAGAAGCCAAGGACAGTAGTAAAGATG
CATAGAAGTGCCTATATAATAAGGAACTGCTGGTTCCAAAATGTCAGTAG
GTGCCACTGTTGATATGTACAGTTAATGAAGAAGGAATGAGAGGTGGTGG
TGTATA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTACACTGAATGCATTTGGCCCTGAG
CTTTAAGCAAAATACGTGTAAGTGGTCCATTTAAATTCTTTATTTTATCT
TGATTTAAATGTAGTAGGAGATAGATAGATAGATAGATAGATAGATAGAT
AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG
AGATAGAGATATATCAATTGGCTGTAATATCCCCCTTTCATCTTTAATTT
TATTTACGTGGATCCCTTCTCTCTGTCTTTTGGCAAGCTTGACTCAAGGT
TGCTCACTATTGTTGATTTTCTCAAAGAACCAAGACCACCTTTCATTGAT
TCTTTGTATCACATTTTTTGTTTGCACCGTTGCTGTTTCTAGTTCATTGA
TTTTTACCCTGAGTCTAACTATTTCTTTCCATTTTCTCCTTTTTAATATT
CTTTCTTCTTGGTTTTCTAGAGATTTCAAGTATATCATTAAGTTATTGAT
ATAAAATCTTTCCAATTTTTTATGTACAGACTTATTGCTACAAACCTTCC
TCTCAAAACTGACTTCATGGTCTTCCATGAAATTTGGAATGTTTTCATTT
TCATTCAATGCCTAAAATGATTTGATTTCCTTTTTTTATTTCTGTCTTGG
TCCAAGTTTTCCTCAATAACGAGTTGTTTGGATCCTTGTAGTTGGCATGC
TTTCT

Query= MSMg01no521_p19.b1 MSMg01no521_p19.b1 CHROMAT_FILE:
MSMg01no521_p19.b1 PHD_FILE: MSMg01no521_p19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:28 2005
         (677 letters)



>mm_chr12_37038549_37039620
          Length = 1072

 Score = 1255 bits (649), Expect = 0.0
 Identities = 665/673 (98%), Gaps = 5/673 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttcatgccattttcgaaggatgcttgacatatagcctacaaaataatctaattt 64
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcatgccattttggaaggatgcttgacatatagcctacaaaataatctaattt 264

                                                                       
Query: 65  atcatgttccaggaaggatcttaaagtaataaattatcatatacaacaataagaaatcca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atcatgttccaggaaggatcttaaagtaataaattatcatatacaacaataagaaatcca 324

                                                                       
Query: 125 cctactggtgatacataacattgattctttggctctgattttcaattttttattttgtag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cctactggtgatacataacattgattctttggctctgattttcaattttttattttgtag 384

                                                                       
Query: 185 aatttttaagatatgtaagagtaaacagaatatatcacgctctgccagccctcaacccat 244
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 385 aatttttaagatatgtaagagtaaacagaatatatcatgctctgccagccctcaacccat 444

                                                                       
Query: 245 gtgagtttacaacaccacaatcctaactaccccccactgtattatcttgacacctattcc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtgagtttacaacaccacaatcctaactaccccccactgtattatcttgacacctattcc 504

                                                                       
Query: 305 cgacaccatcttgttttaacccatggatattttatatctctaaaggataagcagtcatac 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cgacaccatcttgttttaacccatggatattttatatctctaaaggataagcagtcatac 564

                                                                       
Query: 365 tttctaaaataaaatcaaagtaccctgggaaaaaagagaacacttcccttcttatttaat 424
           ||||||||||||||||||||||||||||||||||||||||||||||     |||||||||
Sbjct: 565 tttctaaaataaaatcaaagtaccctgggaaaaaagagaacacttc-----ttatttaat 619

                                                                       
Query: 425 gcttagtcttctattctagtcttctattcgtatgcttactttctttttataataataagc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gcttagtcttctattctagtcttctattcgtatgcttactttctttttataataataagc 679

                                                                       
Query: 485 agaacattgttagttcttaatcagggacggttttgacatgccgggagaaatttggcagta 544
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 680 agaacattgttagttcttaatcagggacggttttgacacgccgggagaaatttggcagta 739

                                                                       
Query: 545 gcagaatttttccttacagcagacagctactgggtagaagccaaggacagtagtaaagat 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gcagaatttttccttacagcagacagctactgggtagaagccaaggacagtagtaaagat 799

                                                                       
Query: 605 gcatagaagtgcctatataataaggaactgctggttccaaaatgtcagtaggtgccactg 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gcatagaagtgcctatataataaggaactgctggttccaaaatgtcagtaggtgccactg 859

                        
Query: 665 ttgatatgtacag 677
           |||||||||||||
Sbjct: 860 ttgatatgtacag 872


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1072
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1062
Effective search space:   708354
Effective search space used:   708354
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)