Query= MSMg01no522_a08.b1 MSMg01no522_a08.b1 CHROMAT_FILE:
MSMg01no522_a08.b1 PHD_FILE: MSMg01no522_a08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:31 2005
(646 letters)
>mm_chr12_95689470_95690515
Length = 1046
Score = 922 bits (477), Expect = 0.0
Identities = 522/537 (97%), Gaps = 5/537 (0%)
Strand = Plus / Minus
Query: 4 ggaattctggttagcatttatgggcacaagcacaaggctgtagagcatctactaaatatt 63
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 581 ggaattctggttagcatgtatgggcacaagcacaaggctgtagagcacctactaaatatt 522
Query: 64 ttgcctaatcacttaagatttctctatgtaatctgctttgcgtggaaaataaagagctct 123
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 521 ttgcctaatcacttaagatttctctacgtaatctgctttgcctggaaaataaagagctct 462
Query: 124 agatgtccatattcaggtaaactacgcaaagtcagtcatgctgcttctctcatatagaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 agatgtccatattcaggtaaactacgcaaagtcagtcatgctgcttctctcatatagaag 402
Query: 184 cataaactaatttgtagcttagcactttttgtgtcttgtttttgtttttattttttcatt 243
| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 401 cctaaactaatttgtagcttagcgctttttgtgtcttgtttttgtttttattttttcatt 342
Query: 244 tatatctctattgattgtaacgcagaagtaatgcgaaaagcaatttcacatttcagttgt 303
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 341 tatatctctatttattgtaacgcagaagtaatgagaaaagcaatttcacatttcagttgt 282
Query: 304 gtcatcacacaatcttcaaaacattaaacaaaattatttgatgaccttaaaaccatatat 363
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 281 gtcatcacacaatcttcaaaacattaaacaaaattatttgataaccttaaaaccatatat 222
Query: 364 ctttaaacaaaagatgagataattattaaaaaaatataaattttaagaatgttgcaagac 423
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 221 cattaaacaaaagatgagataattatt-aaaaaatataaattttaagaatgttgcaagac 163
Query: 424 tattattaaa-ttaaaaaaaa-gggaaagttggcttagatgaaattacatatgtatgtga 481
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 162 tattattaaatttaaaaaaaacgggaaagttggcttagatgaaattacatatgtatgtga 103
Query: 482 caaaataaagttcttttt-aaaaaaatgttattgggtaatttgtttatttacatttc 537
|||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 102 caaaataaagttctttttaaaaaaaat-ttattgggtaatttgtttatttacatttc 47
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_a08.g1 MSMg01no522_a08.g1 CHROMAT_FILE:
MSMg01no522_a08.g1 PHD_FILE: MSMg01no522_a08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:31 2005
(614 letters)
>mm_chr12_95518367_95519379
Length = 1013
Score = 1133 bits (586), Expect = 0.0
Identities = 607/614 (98%), Gaps = 1/614 (0%)
Strand = Plus / Plus
Query: 1 catgatttaaaacattaattccaaaataactaaagattggtaaatctggcaaacaaatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgatttaaaacattaattccaaaataactaaagattggtaaatctggcaaacaaatga 260
Query: 61 taacaagttaaaaccatatgacataaatataagatttatataatgttaaaaatgttaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taacaagttaaaaccatatgacataaatataagatttatataatgttaaaaatgttaatc 320
Query: 121 ctttacaatataaatagaagacagtgctatttttgaaaatcatgctaggttttgaaaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttacaatataaatagaagacagtgctatttttgaaaatcatgctaggttttgaaaaac 380
Query: 181 ttggcatctcagatagtttggaaatttactcagattgaacagtttagtaatatctcattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggcatctcagatagtttggaaatttactcagattgaacagtttagtaatatctcattt 440
Query: 241 cagctttagtttctgtagtctataacttcatataaagttaccaatatacacttcatttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagctttagtttctgtagtctataacttcatataaagttaccaatatacacttcatttat 500
Query: 301 tagcatttaaaaatcaacatataggcataaattagatatatgtttaatttgctacatgtt 360
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 tagcatttaaaaatcagcatataggcataaattagatttatgtttaatttgctacatgtt 560
Query: 361 agtgtgtttctttatgaattatatgtaaagtagagatagacaattagaaagcaaagatac 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtgtgtttctttatgagttatatgtaaagtagagatagacaattagaaagcaaagatac 620
Query: 421 attgttaatcctaagattaacaaaaacaaaacacaaaaaatctaaaaaaaaagtataaat 480
|||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 attgttaatcctaagaatcacaaaaacaaaacacaaaaaatctaaaaaaaa-gtataaat 679
Query: 481 gtgtgaccaaaatgagtcaatttactttaaaaatacatttaaatattaaactctatctgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtgtgaccaaaatgagtcaatttactttaaaaatacatttaaatattaaactctatctgg 739
Query: 541 cagttaatttggtactttcccttttcatgtttttgtaactgactctacagatctcatagc 600
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cagttgatttggtactttcccttttcatgtttttgtaactgactctacagatctcatagc 799
Query: 601 ccttaaaatggaaa 614
||||||||||||||
Sbjct: 800 ccttaaaatggaaa 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1013
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1003
Effective search space: 605812
Effective search space used: 605812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
