Query= MSMg01no522_b21.b1 MSMg01no522_b21.b1 CHROMAT_FILE:
MSMg01no522_b21.b1 PHD_FILE: MSMg01no522_b21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:38 2005
(572 letters)
>mm_chr12_64481413_64482384
Length = 972
Score = 891 bits (461), Expect = 0.0
Identities = 517/569 (90%), Gaps = 52/569 (9%)
Strand = Plus / Plus
Query: 4 ggaattcactactttcttatttttagtacaaatgaattagcaattgaaaagattaaaatt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ggaattcactactttcttatttttagtacaaatgaattagcaattgaaaagattaaaatt 315
Query: 64 tgttgggatttcaaaaaaaaaaaaaaaaaaaagagtccatctcgcactggtgagatggct 123
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 316 tgttgggatttcaaaaaaaaaaaaaaaa----gagtccatctcgcactggtgagatggct 371
Query: 124 tagtggttaagagcactggctgtttttccagagttcctgagttcacttcccaacaatcac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tagtggttaagagcactggctgtttttccagagttcctgagttcacttcccaacaatcac 431
Query: 184 atggtggctcacaaccatctatcaggggaaactgatgccctcttcaggcaggcagttgta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 atggtggctcacaaccatctatcaggggaaactgatgccctcttcaggcaggcagttgta 491
Query: 244 tatgcagcagagcacacgtacattaaataaataaataaataaataaataaataaataaat 303
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tatgcagcagagcacacgtacattaaataaataaataaataaataaataaa--------- 542
Query: 304 aaataaataaataaataaataaataaataaataaataaagtccatctcacagtgatacca 363
|||||||||||||||||||||
Sbjct: 543 ---------------------------------------gtccatctcacagtgatacca 563
Query: 364 cagagatcaacataagagccgagcacaggtggaaacacaatagcatccaactactgcatt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cagagatcaacataagagccgagcacaggtggaaacacaatagcatccaactactgcatt 623
Query: 424 tctcttaggaaaaggatagtatttatagggacatttgtttaggttttcaagctatttctc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tctcttaggaaaaggatagtatttatagggacatttgtttaggttttcaagctatttctc 683
Query: 484 aaaacaatatttttcttaatcaagttttagtgagctttaaaaggataaaaggatatatat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aaaacaatatttttcttaatcaagttttagtgagctttaaaaggataaaaggatatatat 743
Query: 544 caagaaaatgattaacaaatggggattta 572
|||||||||||||||||||||||||||||
Sbjct: 744 caagaaaatgattaacaaatggggattta 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_b21.g1 MSMg01no522_b21.g1 CHROMAT_FILE:
MSMg01no522_b21.g1 PHD_FILE: MSMg01no522_b21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:38 2005
(538 letters)
>mm_chr12_64639027_64639964
Length = 938
Score = 690 bits (357), Expect = 0.0
Identities = 357/357 (100%)
Strand = Plus / Minus
Query: 1 ccacctacttagttattgtatatggtgagggaagggttggacttgcttttgagaggagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ccacctacttagttattgtatatggtgagggaagggttggacttgcttttgagaggagga 298
Query: 61 aaataaaagaagacatatcaatacctcatgaaagaaattccattgaatattattcttact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aaataaaagaagacatatcaatacctcatgaaagaaattccattgaatattattcttact 238
Query: 121 ttaggagagcctctcaaattgaaatgcttaaaaaaatcaatcaccatttatttactaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ttaggagagcctctcaaattgaaatgcttaaaaaaatcaatcaccatttatttactaaat 178
Query: 181 ggggataattcataacaataatctataaacattttctttatacacacaggcaagtgcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 ggggataattcataacaataatctataaacattttctttatacacacaggcaagtgcagt 118
Query: 241 actcacctttcattgagaaaatgtctctttgcaacagagaccaatacagaaaaccataac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 actcacctttcattgagaaaatgtctctttgcaacagagaccaatacagaaaaccataac 58
Query: 301 caatcaaaatgtagaactgtaaaatccagacccaatatttccatcgacaaaatatct 357
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 caatcaaaatgtagaactgtaaaatccagacccaatatttccatcgacaaaatatct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
