NNAACCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCACTTTATGTAGACCAGGCTGGCCTTGAACTCAGATCTCTC
AGCCTCTGCCTCCAGAGTACTGGTATTAAAGGTGTGCATATCATCACCCT
GCTAATTATTTTTATTATGTTTGTGTCTTAGTCAGGGTTTCTATTCCTGG
ACAAAATATCATGACCAAGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAG
CTTACACTTCCACACTGCTGTTCATCACCAAAGGAAGTCAGGACTTGAAC
TCAACCAGGTCAGGAAGCAGGAGCTGATGTAGAGGCCATGGAGGGCCTCT
CCACTTGATCACTAATTGAGAAAATGTCCCACAGCTGGATCTCATGGAGG
CATTTCTCCAACTGAAGCTCCTTTCTCTATGATAACTCCAGCCTGTGTCA
AGTTGACACACACACTCTCTATCTCTCTCTCTCTCACACACACACACACA
CACACACACACACACACACACACACACACACACACAAACCCAGCCAGTAC
AGTTTGTGCATATGAATATGTGTCCATGACTTCAGGTACCTGTGGAGTAC
AGGTGCCTGTGGAGGTCAGAAAGTGTTGGATCCCTTGGAGCTGGAGTTAT
AGACAGTTAGTGAGCTGTCCTGAGATGATGTGGATGCTTGGGATAGAACT
TTGGTCTTCTGCAAGATTGTATGTGCTAAGTGCTGAGCCAGCTCTCCAGT
CCCAAGAATAAATTCTTA

NNAACTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGTGCCCACAAGAATGCAC
GGACAAGTAGCACGTTCTCCCCCAAAAGTTACTGTAGAGGGCAGAGGGCA
GCACTACTCATCCTACAGAGCTGCACACCACCACACAGTGCTATCCAGAA
CTGTCGCAATGATAGAAATACTCTCTATGTGCACTGGCCAAAACCATCGC
TGAACATGTCGGACATACAGCTCCCAAGCACCTGAAATGCAGCTGCTGCA
ATCCAAGGACTGACTCTTATTATTACAGTTACTTTGTGAGAGGCCCATAC
ATGAAGAACATTTGCATCCTTTCCACTCCTCCCTTTCCAACTATGCTCCC
TCTCAAATTCATGACCTCTTCTTCCATAAGTATTATTGTTACACACACAC
ACACACCCTGAATCTATTTATTGTTGCTCAAATGTATACGTGTTTAGGTC
TGACCCCATCAGACTGTATTAATACTTATTATTTTATTATTATTATTATT
ATTATTATTATTATTATTATTATTATCATTGTTTGTATTATTATTTGGGT
ATTTTAGTGTCTTTCGGTTTTTGTTTTGTTATAACAGTCTTACATGGTCC
AAGAGGACCTCAAGTGTAAAGACCTCATGCCTCAGCGTCAGTGTTGGATA
AAGGTGGGTTAAGAATGCATTTTACATGTTCATAAATTTAAACTCACAGA
GCTGGAGCTG

Query= MSMg01no522_d07.g1 MSMg01no522_d07.g1 CHROMAT_FILE:
MSMg01no522_d07.g1 PHD_FILE: MSMg01no522_d07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:45 2005
         (658 letters)



>mm_chr12_25570042_25571099
          Length = 1058

 Score =  977 bits (505), Expect = 0.0
 Identities = 513/519 (98%), Gaps = 6/519 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagtgcccacaagaatgcacggacaagtagcacgttctcccccaaaagttactgtagagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 cagtgcccacaagaatgcacggacaagtagcacgttctcccccaaaagttactgtagagg 454

                                                                       
Query: 61  gcagagggcagcactactcatcctacagagctgcacaccaccacacagtgctatccagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gcagagggcagcactactcatcctacagagctgcacaccaccacacagtgctatccagaa 394

                                                                       
Query: 121 ctgtcgcaatgatagaaatactctctatgtgcactggccaaaaccatcgctgaacatgtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ctgtcgcaatgatagaaatactctctatgtgcactggccaaaaccatcgctgaacatgtc 334

                                                                       
Query: 181 ggacatacagctcccaagcacctgaaatgcagctgctgcaatccaaggactgactcttat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ggacatacagctcccaagcacctgaaatgcagctgctgcaatccaaggactgactcttat 274

                                                                       
Query: 241 tattacagttactttgtgagaggcccatacatgaagaacatttgcatcctttccactcct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tattacagttactttgtgagaggcccatacatgaagaacatttgcatcctttccactcct 214

                                                                       
Query: 301 ccctttccaactatgctccctctcaaattcatgacctcttcttccataagtattattgtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ccctttccaactatgctccctctcaaattcatgacctcttcttccataagtattattgtt 154

                                                                       
Query: 361 acacacacacacacaccctgaatctatttattgttgctcaaatgtatacgtgtttaggtc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 acacacacacacacaccctgaatctatttattgttgctcaaatgtatacgtgtttaggtc 94

                                                                       
Query: 421 tgaccccatcagactgtattaatacttattattttattattattattattattattatta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93  tgaccccatcagactgtattaatacttattattttattattattattattattattatta 34

                                                  
Query: 481 ttattattattattatcattgtttgtattattatttggg 519
           ||||||||||      |||||||||||||||||||||||
Sbjct: 33  ttattattat------cattgtttgtattattatttggg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space:   679104
Effective search space used:   679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)